Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm22952-201ENSMUST00000116720 120 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm14116-201ENSMUST00000117733 805 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm11910-201ENSMUST00000121624 432 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm16330-201ENSMUST00000128324 297 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm22339-201ENSMUST00000157718 62 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm17061-201ENSMUST00000163167 499 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm22852-201ENSMUST00000177899 101 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm27037-201ENSMUST00000182270 960 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm8009-201ENSMUST00000191672 436 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm37375-201ENSMUST00000193859 387 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm37385-201ENSMUST00000195223 387 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 AC151967.1-201ENSMUST00000198146 76 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm43798-201ENSMUST00000202056 394 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm44988-201ENSMUST00000203835 1161 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm8863-201ENSMUST00000216630 926 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Gm5229-201ENSMUST00000039375 354 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Olfr1153-201ENSMUST00000052300 957 ntBASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
H2afb3S4R1G7 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
H2afb3S4R1G7 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.4□□□□□ -1.55
H2afb3S4R1G7 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
H2afb3S4R1G7 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.4□□□□□ -1.55
H2afb3S4R1G7 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
H2afb3S4R1G7 Gm42942-201ENSMUST00000196086 1328 ntBASIC5.4□□□□□ -1.55
H2afb3S4R1G7 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.4□□□□□ -1.55
H2afb3S4R1G7 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
H2afb3S4R1G7 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.4□□□□□ -1.55
H2afb3S4R1G7 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
H2afb3S4R1G7 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.4□□□□□ -1.55
H2afb3S4R1G7 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
H2afb3S4R1G7 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.4□□□□□ -1.55
H2afb3S4R1G7 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm8569-201ENSMUST00000117630 647 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm8501-201ENSMUST00000117684 432 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm12587-201ENSMUST00000120180 427 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm13493-201ENSMUST00000120318 493 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm14331-201ENSMUST00000120396 409 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm25989-201ENSMUST00000158761 133 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm16269-201ENSMUST00000160532 409 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm5947-201ENSMUST00000179156 714 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm5645-201ENSMUST00000179597 714 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm3605-201ENSMUST00000185858 440 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm5268-201ENSMUST00000189212 940 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm37265-201ENSMUST00000191698 885 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm37866-201ENSMUST00000191950 696 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Ighv1-30-201ENSMUST00000194082 349 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms