Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm11105-201ENSMUST00000112781 478 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm9428-201ENSMUST00000127214 769 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm23069-201ENSMUST00000158240 311 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm24767-201ENSMUST00000158509 95 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm23408-201ENSMUST00000158523 265 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm23149-201ENSMUST00000158837 230 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm21772-201ENSMUST00000169213 478 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm17126-201ENSMUST00000172276 523 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm24103-201ENSMUST00000174930 77 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm23450-201ENSMUST00000178285 91 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm21959-201ENSMUST00000178439 452 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm6055-201ENSMUST00000180532 378 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Vis1-201ENSMUST00000183957 201 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Mir7220-201ENSMUST00000183978 60 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Mir7211-201ENSMUST00000184071 63 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm8581-201ENSMUST00000188636 890 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm18444-201ENSMUST00000191239 629 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm37609-201ENSMUST00000191778 678 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm37196-201ENSMUST00000194762 906 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm43779-201ENSMUST00000196691 829 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm43467-201ENSMUST00000197441 437 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm7181-201ENSMUST00000202197 434 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm18537-201ENSMUST00000205709 989 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm19186-201ENSMUST00000219922 333 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm5830-201ENSMUST00000049117 443 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm23502-201ENSMUST00000083902 145 ntBASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms