Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm18592-201ENSMUST00000221529 276 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.49□□□□□ -1.53
Lima1Q9ERG0 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm20486-201ENSMUST00000101544 128 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm12193-201ENSMUST00000117250 379 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm12281-201ENSMUST00000119536 298 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm15781-201ENSMUST00000120216 323 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm13899-201ENSMUST00000121519 1255 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm12494-201ENSMUST00000121684 521 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm15877-201ENSMUST00000121897 964 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm12293-201ENSMUST00000121898 590 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm3715-201ENSMUST00000172308 617 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm29664-201ENSMUST00000191125 463 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm9057-201ENSMUST00000198791 296 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm42886-201ENSMUST00000199214 466 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm9278-201ENSMUST00000205508 553 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm5087-204ENSMUST00000225820 645 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm22684-201ENSMUST00000082849 132 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm10705-201ENSMUST00000098980 461 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Lima1Q9ERG0 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm11902-201ENSMUST00000118849 270 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm14115-201ENSMUST00000119242 482 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm11484-201ENSMUST00000119808 338 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm23995-201ENSMUST00000158060 129 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm3650-201ENSMUST00000180600 747 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Mir6361-201ENSMUST00000185079 101 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm37700-201ENSMUST00000192617 965 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm37336-202ENSMUST00000193705 468 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms