Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Use1Q9CQ56 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Use1Q9CQ56 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Use1Q9CQ56 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Use1Q9CQ56 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Use1Q9CQ56 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Use1Q9CQ56 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Mir546-201ENSMUST00000102105 121 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm9208-201ENSMUST00000120468 948 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm12307-201ENSMUST00000120581 590 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm6446-201ENSMUST00000120604 818 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm11369-201ENSMUST00000120812 318 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm15335-201ENSMUST00000122442 411 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm22116-201ENSMUST00000158791 141 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm24155-201ENSMUST00000175259 110 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm6520-201ENSMUST00000200636 410 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.31□□□□□ -1.56
Use1Q9CQ56 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.31□□□□□ -1.56
Use1Q9CQ56 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Use1Q9CQ56 AV026068-237ENSMUST00000226075 572 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm25133-201ENSMUST00000082647 130 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Snora30-201ENSMUST00000083325 130 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm23795-201ENSMUST00000084006 137 ntBASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Use1Q9CQ56 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.3□□□□□ -1.56
Use1Q9CQ56 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Use1Q9CQ56 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Use1Q9CQ56 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Use1Q9CQ56 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Use1Q9CQ56 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Use1Q9CQ56 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm23311-201ENSMUST00000104152 134 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Use1Q9CQ56 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm22492-201ENSMUST00000157192 297 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm23233-201ENSMUST00000157301 137 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Use1Q9CQ56 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm27998-201ENSMUST00000184902 361 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm37355-201ENSMUST00000193345 606 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm43762-201ENSMUST00000201521 295 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm43105-201ENSMUST00000202987 459 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm8911-201ENSMUST00000213986 652 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm7802-201ENSMUST00000216464 262 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.3□□□□□ -1.56
Use1Q9CQ56 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm18413-201ENSMUST00000221573 655 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm6068-201ENSMUST00000222270 387 ntBASIC5.3□□□□□ -1.56
Use1Q9CQ56 Gm8288-201ENSMUST00000223406 593 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms