Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm25916-201ENSMUST00000104263 131 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Mir467g-201ENSMUST00000116906 120 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm15001-201ENSMUST00000117657 795 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm14614-201ENSMUST00000119873 384 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm12262-201ENSMUST00000119915 305 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm11689-201ENSMUST00000120766 302 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm12140-201ENSMUST00000121214 544 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm25057-201ENSMUST00000157366 88 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm25556-201ENSMUST00000158077 144 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm16134-201ENSMUST00000161714 336 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm24157-201ENSMUST00000175265 111 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Mir7033-201ENSMUST00000184259 81 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm19057-201ENSMUST00000194329 1197 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm43546-201ENSMUST00000196721 943 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm29745-201ENSMUST00000198005 687 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm42713-201ENSMUST00000202709 945 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm44227-201ENSMUST00000203576 241 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm5001-201ENSMUST00000204361 331 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm45136-201ENSMUST00000205793 943 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 AC153971.1-201ENSMUST00000215097 3811 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm2398-201ENSMUST00000218347 883 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm4921-201ENSMUST00000219804 992 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 AV026068-218ENSMUST00000223980 575 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm6863-201ENSMUST00000052882 636 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim11Q99PQ2 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Trim11Q99PQ2 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.46□□□□□ -1.21
Trim11Q99PQ2 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC7.46□□□□□ -1.21
Trim11Q99PQ2 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Trim11Q99PQ2 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Trim11Q99PQ2 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Trim11Q99PQ2 Gm24173-201ENSMUST00000104130 128 ntBASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Gm23527-201ENSMUST00000104570 130 ntBASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Gm11322-201ENSMUST00000118095 435 ntBASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Gm4992-201ENSMUST00000120256 768 ntBASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Gm13508-201ENSMUST00000121639 775 ntBASIC7.46□□□□□ -1.22
Trim11Q99PQ2 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Gm25395-201ENSMUST00000157343 272 ntBASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Gm25839-201ENSMUST00000158921 103 ntBASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Gm8550-201ENSMUST00000161621 653 ntBASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Spanxn4-201ENSMUST00000172433 424 ntBASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Trim11Q99PQ2 Gm21171-201ENSMUST00000180048 673 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms