Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gm44235-201ENSMUST00000204312 3058 ntBASIC7.87□□□□□ -1.15
Usp47Q8BY87 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp47Q8BY87 Gm43359-201ENSMUST00000197944 2200 ntBASIC7.86□□□□□ -1.15
Usp47Q8BY87 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
Usp47Q8BY87 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp47Q8BY87 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Gm25430-201ENSMUST00000157614 289 ntBASIC7.86□□□□□ -1.15
Usp47Q8BY87 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC7.86□□□□□ -1.15
Usp47Q8BY87 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC7.86□□□□□ -1.15
Usp47Q8BY87 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC7.86□□□□□ -1.15
Usp47Q8BY87 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Gm37070-201ENSMUST00000193272 460 ntBASIC7.86□□□□□ -1.15
Usp47Q8BY87 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp47Q8BY87 AC158803.2-201ENSMUST00000219452 679 ntBASIC7.86□□□□□ -1.15
Usp47Q8BY87 CT010486.1-201ENSMUST00000224609 422 ntBASIC7.86□□□□□ -1.15
Usp47Q8BY87 CT030238.4-203ENSMUST00000227343 836 ntBASIC7.86□□□□□ -1.15
Usp47Q8BY87 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Mir129-1-201ENSMUST00000083535 73 ntBASIC7.86□□□□□ -1.15
Usp47Q8BY87 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp47Q8BY87 AC163731.1-201ENSMUST00000225696 3118 ntBASIC7.86□□□□□ -1.15
Usp47Q8BY87 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Gm42440-201ENSMUST00000197906 2284 ntBASIC7.86□□□□□ -1.15
Usp47Q8BY87 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Gm44242-201ENSMUST00000204212 2721 ntBASIC7.86□□□□□ -1.15
Usp47Q8BY87 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC7.86□□□□□ -1.15
Usp47Q8BY87 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp47Q8BY87 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm6134-201ENSMUST00000117265 171 ntBASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC7.85□□□□□ -1.15
Usp47Q8BY87 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm21241-201ENSMUST00000179551 934 ntBASIC7.85□□□□□ -1.15
Usp47Q8BY87 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm20819-201ENSMUST00000191091 925 ntBASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm20871-201ENSMUST00000191322 931 ntBASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Usp47Q8BY87 AC153961.1-201ENSMUST00000217760 385 ntBASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm19169-201ENSMUST00000220109 1246 ntBASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC7.85□□□□□ -1.15
Usp47Q8BY87 AC160980.2-201ENSMUST00000225131 949 ntBASIC7.85□□□□□ -1.15
Usp47Q8BY87 AC156016.5-201ENSMUST00000228742 355 ntBASIC7.85□□□□□ -1.15
Usp47Q8BY87 Mir449a-201ENSMUST00000083641 91 ntBASIC7.85□□□□□ -1.15
Usp47Q8BY87 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.85□□□□□ -1.15
Usp47Q8BY87 Gm42662-201ENSMUST00000202539 1431 ntBASIC7.85□□□□□ -1.15
Usp47Q8BY87 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
Usp47Q8BY87 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms