Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm16270-201ENSMUST00000160327 3238 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm15238-201ENSMUST00000119938 1296 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm11481-201ENSMUST00000120069 255 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm13430-201ENSMUST00000121366 288 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm9006-201ENSMUST00000165520 841 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm22132-201ENSMUST00000175316 100 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm26738-201ENSMUST00000181312 601 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm44795-201ENSMUST00000205496 319 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm6702-201ENSMUST00000208496 471 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm36501-201ENSMUST00000221857 745 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 AC157654.1-201ENSMUST00000224130 820 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 CU024892.1-201ENSMUST00000224869 515 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 AC124408.2-201ENSMUST00000228168 645 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 AC123665.4-201ENSMUST00000228790 249 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm23624-201ENSMUST00000082463 321 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm25682-201ENSMUST00000083942 164 ntBASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp40Q8BWR4 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm15754-201ENSMUST00000119191 478 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm15186-201ENSMUST00000119345 563 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm15379-201ENSMUST00000121224 648 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm24551-201ENSMUST00000158645 92 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm23774-201ENSMUST00000158990 131 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm27225-201ENSMUST00000183833 557 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm6680-201ENSMUST00000192789 950 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm37989-201ENSMUST00000195202 803 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm37614-201ENSMUST00000195645 210 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm42720-201ENSMUST00000196813 300 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm38670-201ENSMUST00000199248 77 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm44181-201ENSMUST00000203106 483 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm17994-201ENSMUST00000209260 533 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm6011-201ENSMUST00000211736 1796 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Gm38026-201ENSMUST00000193284 3880 ntBASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Usp40Q8BWR4 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 AC122769.3-201ENSMUST00000227739 3245 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm18594-201ENSMUST00000175733 1403 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm45413-201ENSMUST00000210389 3538 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Ear-ps2-201ENSMUST00000100689 466 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm13890-201ENSMUST00000117578 390 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm14515-201ENSMUST00000121327 216 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms