Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm12001-201ENSMUST00000121727 913 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm22993-201ENSMUST00000175423 254 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm29492-201ENSMUST00000187124 457 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm28066-201ENSMUST00000188657 472 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm18692-201ENSMUST00000193047 511 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm18007-201ENSMUST00000205019 844 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm7443-201ENSMUST00000206355 378 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 AC122901.2-201ENSMUST00000216926 285 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 AC129597.1-201ENSMUST00000223046 1234 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 AC154184.2-201ENSMUST00000225335 349 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm16129-201ENSMUST00000152628 486 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm16147-201ENSMUST00000162143 373 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm17164-201ENSMUST00000169013 506 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm28507-201ENSMUST00000189737 703 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm28926-201ENSMUST00000191063 680 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm9332-201ENSMUST00000198431 730 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 AC154252.1-201ENSMUST00000226041 473 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 CT025538.2-201ENSMUST00000226083 772 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 AC098742.1-201ENSMUST00000227945 373 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.8□□□□□ -1.32
Ddx55Q6ZPL9 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.79□□□□□ -1.32
Ddx55Q6ZPL9 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.79□□□□□ -1.32
Ddx55Q6ZPL9 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ddx55Q6ZPL9 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx55Q6ZPL9 Gm12586-201ENSMUST00000117328 1316 ntBASIC6.79□□□□□ -1.32
Ddx55Q6ZPL9 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ddx55Q6ZPL9 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.79□□□□□ -1.32
Ddx55Q6ZPL9 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.79□□□□□ -1.32
Ddx55Q6ZPL9 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ddx55Q6ZPL9 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ddx55Q6ZPL9 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Ddx55Q6ZPL9 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 123.4 ms