Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm23441-201ENSMUST00000157268 127 ntBASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm22932-201ENSMUST00000175510 72 ntBASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm27219-201ENSMUST00000184633 742 ntBASIC6.41□□□□□ -1.38
Usp49Q6P9L4 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm37024-201ENSMUST00000192224 868 ntBASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm18409-202ENSMUST00000220105 529 ntBASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 AC154851.2-201ENSMUST00000222172 644 ntBASIC6.41□□□□□ -1.38
Usp49Q6P9L4 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm7042-201ENSMUST00000223027 384 ntBASIC6.41□□□□□ -1.38
Usp49Q6P9L4 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.41□□□□□ -1.38
Usp49Q6P9L4 AC165437.1-201ENSMUST00000228640 536 ntBASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm44829-201ENSMUST00000208008 3193 ntBASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp49Q6P9L4 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.41□□□□□ -1.38
Usp49Q6P9L4 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Gm13532-201ENSMUST00000120373 240 ntBASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Gm11852-201ENSMUST00000120806 222 ntBASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Gm19560-201ENSMUST00000177510 514 ntBASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Gm37187-201ENSMUST00000193425 341 ntBASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Gm17952-201ENSMUST00000193914 747 ntBASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Gm38018-201ENSMUST00000195651 540 ntBASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Mir6906-201ENSMUST00000198998 58 ntBASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Gm31166-201ENSMUST00000209326 288 ntBASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Gm6776-201ENSMUST00000057752 900 ntBASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Usp49Q6P9L4 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Usp49Q6P9L4 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
Usp49Q6P9L4 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Usp49Q6P9L4 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.4□□□□□ -1.39
Usp49Q6P9L4 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.4□□□□□ -1.39
Usp49Q6P9L4 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.4□□□□□ -1.39
Usp49Q6P9L4 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Usp49Q6P9L4 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.4□□□□□ -1.39
Usp49Q6P9L4 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Gm11270-201ENSMUST00000117685 471 ntBASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Gm12732-201ENSMUST00000121688 180 ntBASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Gm14237-201ENSMUST00000122080 430 ntBASIC6.39□□□□□ -1.39
Usp49Q6P9L4 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms