Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Casc4Q6P2L7 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Casc4Q6P2L7 Gm24919-201ENSMUST00000083020 106 ntBASIC5.86□□□□□ -1.47
Casc4Q6P2L7 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Casc4Q6P2L7 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Casc4Q6P2L7 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Casc4Q6P2L7 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.86□□□□□ -1.47
Casc4Q6P2L7 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Gm14938-201ENSMUST00000119482 943 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Gm22867-201ENSMUST00000157499 109 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Gm34768-201ENSMUST00000193884 565 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Gm44108-201ENSMUST00000203525 422 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Gm44571-201ENSMUST00000208092 533 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Gm45628-201ENSMUST00000210849 274 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Gm8523-201ENSMUST00000211386 552 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 CT025552.1-201ENSMUST00000224561 521 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Casc4Q6P2L7 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm11105-201ENSMUST00000112781 478 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm12099-201ENSMUST00000118660 750 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm14679-201ENSMUST00000121536 722 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm22492-201ENSMUST00000157192 297 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm21772-201ENSMUST00000169213 478 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm17126-201ENSMUST00000172276 523 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm20453-201ENSMUST00000173968 226 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm5066-201ENSMUST00000188479 822 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm5830-201ENSMUST00000049117 443 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Mir298-201ENSMUST00000083476 82 ntBASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Casc4Q6P2L7 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms