Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Shmt1P50431 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Shmt1P50431 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Shmt1P50431 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Shmt1P50431 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm14382-201ENSMUST00000117374 437 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm7927-201ENSMUST00000118818 880 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm14783-201ENSMUST00000118900 663 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm14842-201ENSMUST00000119577 269 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm12587-201ENSMUST00000120180 427 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Gm14212-201ENSMUST00000122023 826 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm14349-201ENSMUST00000137155 902 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.39□□□□□ -1.39
Shmt1P50431 Gm22339-201ENSMUST00000157718 62 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm26371-201ENSMUST00000157829 104 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm24395-201ENSMUST00000158139 125 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm24735-201ENSMUST00000158859 118 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm16300-201ENSMUST00000160031 1279 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm8321-201ENSMUST00000181691 980 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Mir6362-201ENSMUST00000184329 107 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC6.39□□□□□ -1.39
Shmt1P50431 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm29815-201ENSMUST00000202418 178 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.39□□□□□ -1.39
Shmt1P50431 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.39□□□□□ -1.39
Shmt1P50431 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC6.39□□□□□ -1.39
Shmt1P50431 Gm6841-201ENSMUST00000220602 598 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 AC117656.3-205ENSMUST00000224606 1205 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 AC166574.7-201ENSMUST00000228502 704 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
Shmt1P50431 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Shmt1P50431 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Shmt1P50431 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Shmt1P50431 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Shmt1P50431 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Shmt1P50431 Gm18594-201ENSMUST00000175733 1403 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Shmt1P50431 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.39□□□□□ -1.39
Shmt1P50431 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Shmt1P50431 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.39□□□□□ -1.39
Shmt1P50431 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.38□□□□□ -1.39
Shmt1P50431 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Shmt1P50431 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.38□□□□□ -1.39
Shmt1P50431 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
Shmt1P50431 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Shmt1P50431 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.38□□□□□ -1.39
Shmt1P50431 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Shmt1P50431 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Shmt1P50431 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.38□□□□□ -1.39
Shmt1P50431 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Shmt1P50431 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Shmt1P50431 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Shmt1P50431 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Shmt1P50431 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Shmt1P50431 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Shmt1P50431 Gm13428-201ENSMUST00000117540 365 ntBASIC6.38□□□□□ -1.39
Shmt1P50431 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC6.38□□□□□ -1.39
Shmt1P50431 Gm13469-201ENSMUST00000118231 350 ntBASIC6.38□□□□□ -1.39
Shmt1P50431 Gm14463-201ENSMUST00000121117 498 ntBASIC6.38□□□□□ -1.39
Shmt1P50431 Gm23082-201ENSMUST00000157852 133 ntBASIC6.38□□□□□ -1.39
Shmt1P50431 Gm23030-201ENSMUST00000158004 273 ntBASIC6.38□□□□□ -1.39
Shmt1P50431 Gm23995-201ENSMUST00000158060 129 ntBASIC6.38□□□□□ -1.39
Shmt1P50431 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC6.38□□□□□ -1.39
Shmt1P50431 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.38□□□□□ -1.39
Shmt1P50431 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC6.38□□□□□ -1.39
Shmt1P50431 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.38□□□□□ -1.39
Shmt1P50431 Gm18407-201ENSMUST00000192126 790 ntBASIC6.38□□□□□ -1.39
Shmt1P50431 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.38□□□□□ -1.39
Shmt1P50431 Gm31520-201ENSMUST00000203048 733 ntBASIC6.38□□□□□ -1.39
Shmt1P50431 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.38□□□□□ -1.39
Shmt1P50431 Gm33178-201ENSMUST00000212090 257 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms