Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm25631-201ENSMUST00000104390 130 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Rfx1P48377 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Rfx1P48377 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rfx1P48377 Gm11653-201ENSMUST00000119992 1009 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Mup-ps21-201ENSMUST00000119998 448 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Gm11882-201ENSMUST00000121463 506 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Rfx1P48377 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Rfx1P48377 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rfx1P48377 Gm18128-201ENSMUST00000172625 511 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Rfx1P48377 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rfx1P48377 Gm26587-201ENSMUST00000180795 989 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Gm26914-201ENSMUST00000182262 223 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Gm21542-201ENSMUST00000182307 993 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Gm9556-201ENSMUST00000182938 940 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC7.69□□□□□ -1.18
Rfx1P48377 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Rfx1P48377 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Rfx1P48377 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rfx1P48377 Gm7412-201ENSMUST00000191692 605 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Gm38261-201ENSMUST00000192608 316 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Rfx1P48377 Gm20926-201ENSMUST00000194457 696 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Gm17771-201ENSMUST00000194477 1147 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Gm26413-201ENSMUST00000196783 126 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Gm44265-201ENSMUST00000203631 465 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Rfx1P48377 Gm9357-201ENSMUST00000207138 805 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC7.69□□□□□ -1.18
Rfx1P48377 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Rfx1P48377 CT030260.1-201ENSMUST00000223243 442 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 AC124524.2-201ENSMUST00000223940 588 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 AC091237.1-201ENSMUST00000224911 637 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Rfx1P48377 CT030238.3-201ENSMUST00000227352 875 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Rfx1P48377 Mir296-201ENSMUST00000083587 79 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Rfx1P48377 Gm37186-201ENSMUST00000195629 2861 ntBASIC7.69□□□□□ -1.18
Rfx1P48377 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rfx1P48377 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rfx1P48377 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Rfx1P48377 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rfx1P48377 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rfx1P48377 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC7.69□□□□□ -1.18
Rfx1P48377 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Rfx1P48377 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Rfx1P48377 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Rfx1P48377 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm9874-202ENSMUST00000194957 1464 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm45415-201ENSMUST00000209644 2074 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm24173-201ENSMUST00000104130 128 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm7821-201ENSMUST00000117111 788 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm14365-201ENSMUST00000117535 587 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm15001-201ENSMUST00000117657 795 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm11845-201ENSMUST00000117886 327 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm15310-201ENSMUST00000117891 372 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm12937-201ENSMUST00000118333 448 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm12104-201ENSMUST00000120359 979 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm23505-201ENSMUST00000158989 130 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm18604-201ENSMUST00000172535 558 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm4308-201ENSMUST00000179735 914 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm28094-201ENSMUST00000185262 390 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm21654-201ENSMUST00000188086 691 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm28788-201ENSMUST00000189717 375 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm29558-201ENSMUST00000190134 375 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm18428-201ENSMUST00000194986 791 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms