Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HttP42859 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HttP42859 Pcdh15-241ENSMUST00000195531 5241 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HttP42859 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HttP42859 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HttP42859 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
HttP42859 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HttP42859 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.69□□□□□ -1.5
HttP42859 Scarna10-201ENSMUST00000158992 325 ntBASIC5.69□□□□□ -1.5
HttP42859 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.69□□□□□ -1.5
HttP42859 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HttP42859 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.69□□□□□ -1.5
HttP42859 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HttP42859 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HttP42859 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HttP42859 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HttP42859 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HttP42859 Gm12112-201ENSMUST00000117772 231 ntBASIC5.68□□□□□ -1.5
HttP42859 Gm14515-201ENSMUST00000121327 216 ntBASIC5.68□□□□□ -1.5
HttP42859 Gm28859-201ENSMUST00000186650 616 ntBASIC5.68□□□□□ -1.5
HttP42859 Gm3145-201ENSMUST00000188584 220 ntBASIC5.68□□□□□ -1.5
HttP42859 Gm8719-201ENSMUST00000203602 534 ntBASIC5.68□□□□□ -1.5
HttP42859 Gm3912-203ENSMUST00000211024 367 ntBASIC5.68□□□□□ -1.5
HttP42859 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.68□□□□□ -1.5
HttP42859 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.68□□□□□ -1.5
HttP42859 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC5.68□□□□□ -1.5
HttP42859 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HttP42859 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC5.68□□□□□ -1.5
HttP42859 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HttP42859 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HttP42859 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HttP42859 Gm44742-201ENSMUST00000207190 1412 ntBASIC5.68□□□□□ -1.5
HttP42859 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HttP42859 Gm5963-201ENSMUST00000143451 236 ntBASIC5.68□□□□□ -1.5
HttP42859 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.68□□□□□ -1.5
HttP42859 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.68□□□□□ -1.5
HttP42859 Gm29736-201ENSMUST00000198189 385 ntBASIC5.68□□□□□ -1.5
HttP42859 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HttP42859 AC154198.1-201ENSMUST00000222839 424 ntBASIC5.68□□□□□ -1.5
HttP42859 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HttP42859 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.68□□□□□ -1.5
HttP42859 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HttP42859 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HttP42859 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HttP42859 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HttP42859 Gm7416-201ENSMUST00000117448 1487 ntBASIC5.68□□□□□ -1.5
HttP42859 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HttP42859 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.68□□□□□ -1.5
HttP42859 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HttP42859 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HttP42859 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HttP42859 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC5.68□□□□□ -1.5
HttP42859 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HttP42859 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HttP42859 Gm8145-201ENSMUST00000118220 745 ntBASIC5.68□□□□□ -1.5
HttP42859 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HttP42859 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.68□□□□□ -1.5
HttP42859 Gm15388-201ENSMUST00000121578 726 ntBASIC5.68□□□□□ -1.5
HttP42859 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.68□□□□□ -1.5
HttP42859 Gm7299-201ENSMUST00000194441 581 ntBASIC5.68□□□□□ -1.5
HttP42859 Gm43580-201ENSMUST00000202892 284 ntBASIC5.68□□□□□ -1.5
HttP42859 Gm44038-201ENSMUST00000203952 889 ntBASIC5.68□□□□□ -1.5
HttP42859 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC5.68□□□□□ -1.5
HttP42859 Gm45236-201ENSMUST00000208632 229 ntBASIC5.68□□□□□ -1.5
HttP42859 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.68□□□□□ -1.5
HttP42859 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.68□□□□□ -1.5
HttP42859 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HttP42859 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
HttP42859 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.67□□□□□ -1.5
HttP42859 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HttP42859 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 AC154642.2-201ENSMUST00000223657 2485 ntBASIC5.67□□□□□ -1.5
HttP42859 Gm37090-201ENSMUST00000195694 4105 ntBASIC5.67□□□□□ -1.5
HttP42859 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HttP42859 Gm37593-201ENSMUST00000191669 3254 ntBASIC5.67□□□□□ -1.5
HttP42859 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
HttP42859 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HttP42859 Gm1866-201ENSMUST00000120701 477 ntBASIC5.67□□□□□ -1.5
HttP42859 Gm45651-201ENSMUST00000210857 335 ntBASIC5.67□□□□□ -1.5
HttP42859 Gm9685-201ENSMUST00000211275 538 ntBASIC5.67□□□□□ -1.5
HttP42859 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.67□□□□□ -1.5
HttP42859 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HttP42859 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HttP42859 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HttP42859 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HttP42859 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HttP42859 Gm14245-201ENSMUST00000118939 1843 ntBASIC5.67□□□□□ -1.5
HttP42859 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
HttP42859 Pogz-205ENSMUST00000107270 6399 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.67□□□□□ -1.5
HttP42859 Gm12755-201ENSMUST00000122297 282 ntBASIC5.67□□□□□ -1.5
HttP42859 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms