Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Traf1P39428 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Traf1P39428 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Traf1P39428 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Traf1P39428 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Traf1P39428 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Traf1P39428 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
Traf1P39428 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Traf1P39428 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Traf1P39428 Gm8424-201ENSMUST00000117716 988 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Gm14695-201ENSMUST00000121721 282 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Gm15877-201ENSMUST00000121897 964 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Gm24065-201ENSMUST00000157487 264 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.73□□□□□ -1.33
Traf1P39428 Gm17121-201ENSMUST00000170414 847 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Mir3095-201ENSMUST00000175552 87 ntBASIC6.73□□□□□ -1.33
Traf1P39428 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Traf1P39428 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Gm17222-201ENSMUST00000180135 847 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Gm27849-201ENSMUST00000183673 125 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6.73□□□□□ -1.33
Traf1P39428 Mir219c-201ENSMUST00000199860 60 ntBASIC6.73□□□□□ -1.33
Traf1P39428 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Traf1P39428 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.73□□□□□ -1.33
Traf1P39428 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.73□□□□□ -1.33
Traf1P39428 Gm8523-201ENSMUST00000211386 552 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Gm6477-201ENSMUST00000217098 764 ntBASIC6.73□□□□□ -1.33
Traf1P39428 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.73□□□□□ -1.33
Traf1P39428 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.73□□□□□ -1.33
Traf1P39428 Gm18409-202ENSMUST00000220105 529 ntBASIC6.73□□□□□ -1.33
Traf1P39428 AC174797.2-203ENSMUST00000224017 716 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.73□□□□□ -1.33
Traf1P39428 AC132317.2-201ENSMUST00000227301 519 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Zfp850-201ENSMUST00000099111 941 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Traf1P39428 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Traf1P39428 Gm43210-201ENSMUST00000196743 6152 ntBASIC6.73□□□□□ -1.33
Traf1P39428 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Traf1P39428 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Traf1P39428 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Traf1P39428 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
Traf1P39428 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Traf1P39428 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Traf1P39428 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.73□□□□□ -1.33
Traf1P39428 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Traf1P39428 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Traf1P39428 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Traf1P39428 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Traf1P39428 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Traf1P39428 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Traf1P39428 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Traf1P39428 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.72□□□□□ -1.33
Traf1P39428 Gm15233-201ENSMUST00000118747 400 ntBASIC6.72□□□□□ -1.33
Traf1P39428 Gm4234-201ENSMUST00000119747 714 ntBASIC6.72□□□□□ -1.33
Traf1P39428 Gm7700-201ENSMUST00000120273 970 ntBASIC6.72□□□□□ -1.33
Traf1P39428 Gm25782-201ENSMUST00000122526 289 ntBASIC6.72□□□□□ -1.33
Traf1P39428 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.72□□□□□ -1.33
Traf1P39428 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.72□□□□□ -1.33
Traf1P39428 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.72□□□□□ -1.33
Traf1P39428 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC6.72□□□□□ -1.33
Traf1P39428 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Traf1P39428 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.72□□□□□ -1.33
Traf1P39428 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Traf1P39428 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC6.72□□□□□ -1.33
Traf1P39428 Mir7037-201ENSMUST00000184414 65 ntBASIC6.72□□□□□ -1.33
Traf1P39428 Gm29356-201ENSMUST00000186935 373 ntBASIC6.72□□□□□ -1.33
Traf1P39428 Gm5734-201ENSMUST00000189787 913 ntBASIC6.72□□□□□ -1.33
Traf1P39428 Gm44221-201ENSMUST00000203552 388 ntBASIC6.72□□□□□ -1.33
Traf1P39428 Gm45026-201ENSMUST00000205292 833 ntBASIC6.72□□□□□ -1.33
Traf1P39428 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.72□□□□□ -1.33
Traf1P39428 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.72□□□□□ -1.33
Traf1P39428 Gm9202-201ENSMUST00000223036 437 ntBASIC6.72□□□□□ -1.33
Traf1P39428 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.72□□□□□ -1.33
Traf1P39428 AC124408.2-201ENSMUST00000228168 645 ntBASIC6.72□□□□□ -1.33
Traf1P39428 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Traf1P39428 Gm26163-201ENSMUST00000083792 178 ntBASIC6.72□□□□□ -1.33
Traf1P39428 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Traf1P39428 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Traf1P39428 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Traf1P39428 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Traf1P39428 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.72□□□□□ -1.33
Traf1P39428 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Traf1P39428 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.72□□□□□ -1.33
Traf1P39428 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Traf1P39428 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.72□□□□□ -1.33
Traf1P39428 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.72□□□□□ -1.33
Traf1P39428 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6.71□□□□□ -1.33
Traf1P39428 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.71□□□□□ -1.33
Traf1P39428 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.71□□□□□ -1.33
Traf1P39428 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.71□□□□□ -1.33
Traf1P39428 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.33
Traf1P39428 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Traf1P39428 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.71□□□□□ -1.34
Traf1P39428 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Traf1P39428 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC6.71□□□□□ -1.34
Traf1P39428 Gm26078-201ENSMUST00000104067 128 ntBASIC6.71□□□□□ -1.34
Traf1P39428 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms