Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
P20040 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
P20040 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
P20040 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
P20040 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.02□□□□□ -1.61
P20040 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
P20040 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
P20040 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
P20040 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
P20040 Gm14791-201ENSMUST00000119061 1166 ntBASIC5.02□□□□□ -1.61
P20040 Gm15331-201ENSMUST00000120225 385 ntBASIC5.02□□□□□ -1.61
P20040 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.02□□□□□ -1.61
P20040 Gm12293-201ENSMUST00000121898 590 ntBASIC5.02□□□□□ -1.61
P20040 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
P20040 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
P20040 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.02□□□□□ -1.61
P20040 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
P20040 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
P20040 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
P20040 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
P20040 Gm29201-201ENSMUST00000189120 431 ntBASIC5.02□□□□□ -1.61
P20040 Gm37341-201ENSMUST00000194680 371 ntBASIC5.02□□□□□ -1.61
P20040 Gm44494-201ENSMUST00000196760 129 ntBASIC5.02□□□□□ -1.61
P20040 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.02□□□□□ -1.61
P20040 Gm43222-201ENSMUST00000199013 603 ntBASIC5.02□□□□□ -1.61
P20040 Gm42646-201ENSMUST00000202233 914 ntBASIC5.02□□□□□ -1.61
P20040 Gm43946-201ENSMUST00000204058 886 ntBASIC5.02□□□□□ -1.61
P20040 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.02□□□□□ -1.61
P20040 Gm8672-201ENSMUST00000221200 332 ntBASIC5.02□□□□□ -1.61
P20040 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
P20040 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
P20040 Gm24029-201ENSMUST00000083928 143 ntBASIC5.02□□□□□ -1.61
P20040 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.02□□□□□ -1.61
P20040 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
P20040 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.02□□□□□ -1.61
P20040 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
P20040 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
P20040 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.02□□□□□ -1.61
P20040 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
P20040 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
P20040 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
P20040 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
P20040 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.01□□□□□ -1.61
P20040 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.01□□□□□ -1.61
P20040 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.01□□□□□ -1.61
P20040 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
P20040 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.01□□□□□ -1.61
P20040 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
P20040 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.01□□□□□ -1.61
P20040 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
P20040 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.01□□□□□ -1.61
P20040 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
P20040 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
P20040 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.01□□□□□ -1.61
P20040 Gm8761-201ENSMUST00000121507 955 ntBASIC5.01□□□□□ -1.61
P20040 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
P20040 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.01□□□□□ -1.61
P20040 Gm24236-201ENSMUST00000157794 134 ntBASIC5.01□□□□□ -1.61
P20040 Gm22361-201ENSMUST00000158435 176 ntBASIC5.01□□□□□ -1.61
P20040 Gm23149-201ENSMUST00000158837 230 ntBASIC5.01□□□□□ -1.61
P20040 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.01□□□□□ -1.61
P20040 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
P20040 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms