Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm27005-201ENSMUST00000182783 921 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lire1P11260 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC5.78□□□□□ -1.48
Lire1P11260 Gm36939-201ENSMUST00000194889 439 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.78□□□□□ -1.48
Lire1P11260 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lire1P11260 Gm42458-201ENSMUST00000201914 369 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.78□□□□□ -1.48
Lire1P11260 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.78□□□□□ -1.48
Lire1P11260 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC5.78□□□□□ -1.48
Lire1P11260 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.78□□□□□ -1.48
Lire1P11260 AC079644.1-201ENSMUST00000220586 405 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Gm46996-201ENSMUST00000220924 408 ntBASIC5.78□□□□□ -1.48
Lire1P11260 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.78□□□□□ -1.48
Lire1P11260 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Lire1P11260 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lire1P11260 AC154838.2-201ENSMUST00000226602 747 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lire1P11260 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lire1P11260 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lire1P11260 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lire1P11260 Olfr519-201ENSMUST00000084752 960 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Lire1P11260 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lire1P11260 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lire1P11260 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lire1P11260 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lire1P11260 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lire1P11260 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.78□□□□□ -1.48
Lire1P11260 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Lire1P11260 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lire1P11260 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Lire1P11260 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.78□□□□□ -1.48
Lire1P11260 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.78□□□□□ -1.48
Lire1P11260 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Lire1P11260 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
Lire1P11260 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Lire1P11260 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lire1P11260 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lire1P11260 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lire1P11260 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Lire1P11260 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.77□□□□□ -1.49
Lire1P11260 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Gm4853-201ENSMUST00000119359 394 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Gm13207-201ENSMUST00000119862 773 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Gm13578-201ENSMUST00000120849 590 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.77□□□□□ -1.49
Lire1P11260 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Lire1P11260 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Gm16456-201ENSMUST00000174431 920 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.77□□□□□ -1.49
Lire1P11260 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lire1P11260 n-R5s109-201ENSMUST00000179195 119 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Mir6418-201ENSMUST00000185075 115 ntBASIC5.77□□□□□ -1.49
Lire1P11260 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Lire1P11260 Gm9443-201ENSMUST00000188406 816 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 Gm37770-201ENSMUST00000192855 772 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lire1P11260 Gm18445-201ENSMUST00000195502 774 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.77□□□□□ -1.49
Lire1P11260 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Lire1P11260 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.77□□□□□ -1.49
Lire1P11260 Gm18838-201ENSMUST00000204855 886 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Gm44487-201ENSMUST00000205145 325 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Gm17997-201ENSMUST00000211801 840 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Gm45710-201ENSMUST00000212847 215 ntBASIC5.77□□□□□ -1.49
Lire1P11260 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 AV026068-216ENSMUST00000223874 328 ntBASIC5.77□□□□□ -1.49
Lire1P11260 AC117769.2-201ENSMUST00000224612 469 ntBASIC5.77□□□□□ -1.49
Lire1P11260 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Gm10205-201ENSMUST00000087431 234 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Lire1P11260 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.77□□□□□ -1.49
Lire1P11260 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Lire1P11260 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Lire1P11260 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
Lire1P11260 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Lire1P11260 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Lire1P11260 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Lire1P11260 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Lire1P11260 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Lire1P11260 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms