Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NpcdF8VQB8 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
NpcdF8VQB8 AC154642.2-201ENSMUST00000223657 2485 ntBASIC7.76□□□□□ -1.17
NpcdF8VQB8 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.76□□□□□ -1.17
NpcdF8VQB8 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NpcdF8VQB8 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.76□□□□□ -1.17
NpcdF8VQB8 Gm37598-201ENSMUST00000194506 1301 ntBASIC7.76□□□□□ -1.17
NpcdF8VQB8 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NpcdF8VQB8 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NpcdF8VQB8 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NpcdF8VQB8 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Gm43425-201ENSMUST00000201793 3291 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Gm14621-201ENSMUST00000117709 689 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Gm11833-201ENSMUST00000118393 853 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Gm23276-201ENSMUST00000157913 138 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Gm25487-201ENSMUST00000158725 125 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Gm16164-201ENSMUST00000160078 468 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Gm28413-201ENSMUST00000189369 291 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Gm44265-201ENSMUST00000203631 465 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC7.75□□□□□ -1.17
NpcdF8VQB8 AC153957.1-201ENSMUST00000215235 229 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 CT025526.1-201ENSMUST00000217327 267 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 AC192616.3-201ENSMUST00000220797 1124 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 AC122393.2-201ENSMUST00000226404 1093 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 AC139845.2-201ENSMUST00000227504 436 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NpcdF8VQB8 n-R5s196-201ENSMUST00000083136 117 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Gm22053-201ENSMUST00000083394 200 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Mir7-2-201ENSMUST00000083675 97 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NpcdF8VQB8 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.75□□□□□ -1.17
NpcdF8VQB8 AC153881.3-201ENSMUST00000218494 1561 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Gm7205-201ENSMUST00000196032 1323 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 AC168056.3-201ENSMUST00000225395 2540 ntBASIC7.75□□□□□ -1.17
NpcdF8VQB8 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NpcdF8VQB8 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NpcdF8VQB8 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 AC131667.1-201ENSMUST00000214665 2175 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NpcdF8VQB8 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
NpcdF8VQB8 CT009734.1-201ENSMUST00000227657 1687 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm22952-201ENSMUST00000116720 120 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm15110-201ENSMUST00000117545 881 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm5073-201ENSMUST00000118222 820 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm14115-201ENSMUST00000119242 482 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm4914-201ENSMUST00000119757 459 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm15158-201ENSMUST00000120577 570 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm14065-201ENSMUST00000120848 585 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm8761-201ENSMUST00000121507 955 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm24236-201ENSMUST00000157794 134 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm23662-201ENSMUST00000158046 111 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm26037-201ENSMUST00000158150 311 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm18560-201ENSMUST00000173463 1123 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm22698-201ENSMUST00000175375 108 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm1972-201ENSMUST00000181606 964 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm18342-201ENSMUST00000186987 694 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm2427-201ENSMUST00000189121 881 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Mrgpra14-201ENSMUST00000189782 913 ntBASIC7.74□□□□□ -1.17
NpcdF8VQB8 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms