Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn1aA2APX8 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Scn1aA2APX8 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Scn1aA2APX8 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Scarna10-201ENSMUST00000158992 325 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm6223-201ENSMUST00000178436 871 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm5946-201ENSMUST00000182340 970 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm14849-201ENSMUST00000122293 2846 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm11975-201ENSMUST00000118772 481 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm37681-201ENSMUST00000193880 727 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 AC153961.1-201ENSMUST00000217760 385 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Scn1aA2APX8 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.81□□□□□ -1.48
Scn1aA2APX8 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Scn1aA2APX8 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm45001-201ENSMUST00000208279 2515 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm38070-201ENSMUST00000191850 6480 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm11561-201ENSMUST00000117429 417 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm12074-201ENSMUST00000120189 219 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm17223-201ENSMUST00000171413 481 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm22569-201ENSMUST00000175545 124 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm2367-201ENSMUST00000192374 472 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm19739-201ENSMUST00000195941 153 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm44134-202ENSMUST00000204777 545 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scn1aA2APX8 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Scn1aA2APX8 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm9386-201ENSMUST00000095195 381 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scn1aA2APX8 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Scn1aA2APX8 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scn1aA2APX8 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Scn1aA2APX8 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.79□□□□□ -1.48
Scn1aA2APX8 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms