Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CtcflA2APF3 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm26289-201ENSMUST00000104169 131 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm22499-201ENSMUST00000104501 135 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm12131-201ENSMUST00000117479 359 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm7927-201ENSMUST00000118818 880 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm15181-201ENSMUST00000120142 177 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm12438-201ENSMUST00000122034 336 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CtcflA2APF3 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CtcflA2APF3 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CtcflA2APF3 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CtcflA2APF3 Mirt2-201ENSMUST00000175179 285 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm24300-201ENSMUST00000177809 109 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm24017-201ENSMUST00000178726 109 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm23952-201ENSMUST00000179380 109 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm9443-201ENSMUST00000188406 816 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm29664-201ENSMUST00000191125 463 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.17□□□□□ -1.58
CtcflA2APF3 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm44580-201ENSMUST00000206333 877 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm45448-201ENSMUST00000211739 209 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.17□□□□□ -1.58
CtcflA2APF3 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CtcflA2APF3 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CtcflA2APF3 Olfr192-201ENSMUST00000080251 925 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm23302-201ENSMUST00000082710 100 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CtcflA2APF3 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CtcflA2APF3 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CtcflA2APF3 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CtcflA2APF3 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CtcflA2APF3 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.17□□□□□ -1.58
CtcflA2APF3 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CtcflA2APF3 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CtcflA2APF3 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CtcflA2APF3 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.16□□□□□ -1.58
CtcflA2APF3 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm11561-201ENSMUST00000117429 417 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm11781-201ENSMUST00000118328 472 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm15078-201ENSMUST00000118371 782 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm15366-201ENSMUST00000118433 1019 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm14876-201ENSMUST00000120795 327 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm12618-201ENSMUST00000121754 483 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm16102-201ENSMUST00000160955 420 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm4832-201ENSMUST00000182679 399 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm37189-201ENSMUST00000192131 298 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm37341-201ENSMUST00000194680 371 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm18330-201ENSMUST00000199246 547 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm7492-201ENSMUST00000201745 725 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm44053-201ENSMUST00000203364 929 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm3912-203ENSMUST00000211024 367 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CtcflA2APF3 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC5.16□□□□□ -1.58
CtcflA2APF3 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CtcflA2APF3 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm26063-201ENSMUST00000083378 107 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CtcflA2APF3 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CtcflA2APF3 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CtcflA2APF3 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
CtcflA2APF3 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
CtcflA2APF3 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
CtcflA2APF3 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CtcflA2APF3 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.16□□□□□ -1.58
CtcflA2APF3 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CtcflA2APF3 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CtcflA2APF3 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CtcflA2APF3 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.15□□□□□ -1.58
CtcflA2APF3 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CtcflA2APF3 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.15□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms