Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Mir5133-201ENSMUST00000174955 77 ntBASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Gm10602-201ENSMUST00000098239 609 ntBASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcn2Q9R0A1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.25■□□□□ 0.51
Clcn2Q9R0A1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn2Q9R0A1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn2Q9R0A1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Clcn2Q9R0A1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Clcn2Q9R0A1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn2Q9R0A1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.25■□□□□ 0.51
Clcn2Q9R0A1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn2Q9R0A1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Clcn2Q9R0A1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn2Q9R0A1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clcn2Q9R0A1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Clcn2Q9R0A1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn2Q9R0A1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn2Q9R0A1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn2Q9R0A1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn2Q9R0A1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn2Q9R0A1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn2Q9R0A1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.24■□□□□ 0.51
Clcn2Q9R0A1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Clcn2Q9R0A1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Clcn2Q9R0A1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn2Q9R0A1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn2Q9R0A1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn2Q9R0A1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn2Q9R0A1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn2Q9R0A1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clcn2Q9R0A1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Gm6211-202ENSMUST00000167849 925 ntBASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn2Q9R0A1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Gm8969-201ENSMUST00000199694 526 ntBASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn2Q9R0A1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn2Q9R0A1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn2Q9R0A1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn2Q9R0A1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn2Q9R0A1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn2Q9R0A1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Clcn2Q9R0A1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn2Q9R0A1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn2Q9R0A1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Clcn2Q9R0A1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 115.5 ms