Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.63■□□□□ 0.73
Phtf1Q9QZ09 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.63■□□□□ 0.73
Phtf1Q9QZ09 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.63■□□□□ 0.73
Phtf1Q9QZ09 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Phtf1Q9QZ09 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Phtf1Q9QZ09 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Phtf1Q9QZ09 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Phtf1Q9QZ09 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Phtf1Q9QZ09 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Phtf1Q9QZ09 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Phtf1Q9QZ09 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Phtf1Q9QZ09 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Phtf1Q9QZ09 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.62■□□□□ 0.73
Phtf1Q9QZ09 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Phtf1Q9QZ09 Gm37292-201ENSMUST00000192062 758 ntBASIC19.62■□□□□ 0.73
Phtf1Q9QZ09 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.62■□□□□ 0.73
Phtf1Q9QZ09 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Phtf1Q9QZ09 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Phtf1Q9QZ09 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.62■□□□□ 0.73
Phtf1Q9QZ09 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Phtf1Q9QZ09 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Phtf1Q9QZ09 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Phtf1Q9QZ09 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Phtf1Q9QZ09 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Phtf1Q9QZ09 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.6■□□□□ 0.73
Phtf1Q9QZ09 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Phtf1Q9QZ09 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Phtf1Q9QZ09 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Phtf1Q9QZ09 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Phtf1Q9QZ09 Gm43183-201ENSMUST00000200632 547 ntBASIC19.6■□□□□ 0.73
Phtf1Q9QZ09 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Phtf1Q9QZ09 Idnk-204ENSMUST00000226010 1898 ntBASIC19.6■□□□□ 0.73
Phtf1Q9QZ09 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.6■□□□□ 0.73
Phtf1Q9QZ09 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Phtf1Q9QZ09 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Phtf1Q9QZ09 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
Phtf1Q9QZ09 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Phtf1Q9QZ09 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.58■□□□□ 0.73
Phtf1Q9QZ09 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Phtf1Q9QZ09 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Phtf1Q9QZ09 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.58■□□□□ 0.72
Phtf1Q9QZ09 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Phtf1Q9QZ09 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Phtf1Q9QZ09 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Phtf1Q9QZ09 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Phtf1Q9QZ09 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Phtf1Q9QZ09 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Phtf1Q9QZ09 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Phtf1Q9QZ09 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.57■□□□□ 0.72
Phtf1Q9QZ09 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Phtf1Q9QZ09 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Phtf1Q9QZ09 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Phtf1Q9QZ09 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Phtf1Q9QZ09 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Phtf1Q9QZ09 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Phtf1Q9QZ09 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Phtf1Q9QZ09 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Phtf1Q9QZ09 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Phtf1Q9QZ09 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Phtf1Q9QZ09 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Phtf1Q9QZ09 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Phtf1Q9QZ09 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms