Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh5Q9QUM7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Msh5Q9QUM7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh5Q9QUM7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Msh5Q9QUM7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.2■□□□□ 0.5
Msh5Q9QUM7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.2■□□□□ 0.5
Msh5Q9QUM7 Gm37179-201ENSMUST00000194862 823 ntBASIC18.2■□□□□ 0.5
Msh5Q9QUM7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.2■□□□□ 0.5
Msh5Q9QUM7 Gm6365-201ENSMUST00000054711 744 ntBASIC18.2■□□□□ 0.5
Msh5Q9QUM7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Msh5Q9QUM7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh5Q9QUM7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC18.19■□□□□ 0.5
Msh5Q9QUM7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh5Q9QUM7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC18.18■□□□□ 0.5
Msh5Q9QUM7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.18■□□□□ 0.5
Msh5Q9QUM7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Msh5Q9QUM7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh5Q9QUM7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh5Q9QUM7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh5Q9QUM7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh5Q9QUM7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh5Q9QUM7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh5Q9QUM7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Msh5Q9QUM7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh5Q9QUM7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh5Q9QUM7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh5Q9QUM7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh5Q9QUM7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh5Q9QUM7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Msh5Q9QUM7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Msh5Q9QUM7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Msh5Q9QUM7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh5Q9QUM7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Msh5Q9QUM7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh5Q9QUM7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Msh5Q9QUM7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh5Q9QUM7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.16■□□□□ 0.5
Msh5Q9QUM7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Msh5Q9QUM7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Msh5Q9QUM7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh5Q9QUM7 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Msh5Q9QUM7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Msh5Q9QUM7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Msh5Q9QUM7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Msh5Q9QUM7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms