Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Crlf1Q9JM58 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Crlf1Q9JM58 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf1Q9JM58 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf1Q9JM58 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf1Q9JM58 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Crlf1Q9JM58 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf1Q9JM58 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Crlf1Q9JM58 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf1Q9JM58 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf1Q9JM58 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf1Q9JM58 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Crlf1Q9JM58 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Crlf1Q9JM58 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Crlf1Q9JM58 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Crlf1Q9JM58 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Crlf1Q9JM58 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Gm27357-201ENSMUST00000183754 135 ntBASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf1Q9JM58 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Gm4974-201ENSMUST00000209974 875 ntBASIC14.32□□□□□ -0.12
Crlf1Q9JM58 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf1Q9JM58 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Gm28659-201ENSMUST00000188013 759 ntBASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf1Q9JM58 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crlf1Q9JM58 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Crlf1Q9JM58 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crlf1Q9JM58 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Crlf1Q9JM58 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Crlf1Q9JM58 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Crlf1Q9JM58 Gm11355-201ENSMUST00000121120 306 ntBASIC14.3□□□□□ -0.12
Crlf1Q9JM58 Gm11950-201ENSMUST00000121615 838 ntBASIC14.3□□□□□ -0.12
Crlf1Q9JM58 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.3□□□□□ -0.12
Crlf1Q9JM58 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.3□□□□□ -0.12
Crlf1Q9JM58 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms