Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb3Q9ERD7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb3Q9ERD7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb3Q9ERD7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.76■□□□□ 0.43
Tubb3Q9ERD7 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.76■□□□□ 0.43
Tubb3Q9ERD7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb3Q9ERD7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Tubb3Q9ERD7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb3Q9ERD7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Tubb3Q9ERD7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb3Q9ERD7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb3Q9ERD7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb3Q9ERD7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.76■□□□□ 0.43
Tubb3Q9ERD7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb3Q9ERD7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubb3Q9ERD7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Gm12527-201ENSMUST00000117967 564 ntBASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Gm20760-201ENSMUST00000179197 648 ntBASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Gm26524-201ENSMUST00000192339 390 ntBASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb3Q9ERD7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 Gm8969-201ENSMUST00000199694 526 ntBASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb3Q9ERD7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb3Q9ERD7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb3Q9ERD7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb3Q9ERD7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.73■□□□□ 0.43
Tubb3Q9ERD7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb3Q9ERD7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Tubb3Q9ERD7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb3Q9ERD7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb3Q9ERD7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb3Q9ERD7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb3Q9ERD7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb3Q9ERD7 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Gm20049-201ENSMUST00000219950 730 ntBASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Rab3c-203ENSMUST00000224180 967 ntBASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb3Q9ERD7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb3Q9ERD7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb3Q9ERD7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb3Q9ERD7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Tubb3Q9ERD7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb3Q9ERD7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.71■□□□□ 0.43
Tubb3Q9ERD7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb3Q9ERD7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb3Q9ERD7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb3Q9ERD7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb3Q9ERD7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb3Q9ERD7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb3Q9ERD7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms