Protein–RNA interactions for Protein: Q9EPE9

Atp13a1, Manganese-transporting ATPase 13A1, mousemouse

Known RBP Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a1Q9EPE9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atp13a1Q9EPE9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atp13a1Q9EPE9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atp13a1Q9EPE9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Atp13a1Q9EPE9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
Atp13a1Q9EPE9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Atp13a1Q9EPE9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a1Q9EPE9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a1Q9EPE9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a1Q9EPE9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Atp13a1Q9EPE9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.32■□□□□ 0.68
Atp13a1Q9EPE9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.32■□□□□ 0.68
Atp13a1Q9EPE9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a1Q9EPE9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a1Q9EPE9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.32■□□□□ 0.68
Atp13a1Q9EPE9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a1Q9EPE9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a1Q9EPE9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a1Q9EPE9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a1Q9EPE9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a1Q9EPE9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp13a1Q9EPE9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp13a1Q9EPE9 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp13a1Q9EPE9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Atp13a1Q9EPE9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a1Q9EPE9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Atp13a1Q9EPE9 Gm10418-201ENSMUST00000100943 576 ntBASIC19.29■□□□□ 0.68
Atp13a1Q9EPE9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.29■□□□□ 0.68
Atp13a1Q9EPE9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.29■□□□□ 0.68
Atp13a1Q9EPE9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a1Q9EPE9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a1Q9EPE9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.29■□□□□ 0.68
Atp13a1Q9EPE9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a1Q9EPE9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a1Q9EPE9 Gm5417-201ENSMUST00000079706 384 ntBASIC19.29■□□□□ 0.68
Atp13a1Q9EPE9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a1Q9EPE9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a1Q9EPE9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp13a1Q9EPE9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Atp13a1Q9EPE9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a1Q9EPE9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Atp13a1Q9EPE9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a1Q9EPE9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.28■□□□□ 0.68
Atp13a1Q9EPE9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a1Q9EPE9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a1Q9EPE9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Atp13a1Q9EPE9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a1Q9EPE9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a1Q9EPE9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a1Q9EPE9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp13a1Q9EPE9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Atp13a1Q9EPE9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp13a1Q9EPE9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp13a1Q9EPE9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atp13a1Q9EPE9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Atp13a1Q9EPE9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp13a1Q9EPE9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp13a1Q9EPE9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atp13a1Q9EPE9 Gm21814-202ENSMUST00000203277 873 ntBASIC19.27■□□□□ 0.68
Atp13a1Q9EPE9 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.27■□□□□ 0.68
Atp13a1Q9EPE9 Timm23-208ENSMUST00000226683 750 ntBASIC19.27■□□□□ 0.68
Atp13a1Q9EPE9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Atp13a1Q9EPE9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atp13a1Q9EPE9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Atp13a1Q9EPE9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp13a1Q9EPE9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp13a1Q9EPE9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp13a1Q9EPE9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atp13a1Q9EPE9 Gm15565-201ENSMUST00000118890 427 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms