Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hmg20aQ9DC33 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hmg20aQ9DC33 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hmg20aQ9DC33 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.36■□□□□ 0.21
Hmg20aQ9DC33 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Dancr-204ENSMUST00000132389 2347 ntBASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmg20aQ9DC33 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmg20aQ9DC33 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmg20aQ9DC33 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmg20aQ9DC33 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Hmg20aQ9DC33 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmg20aQ9DC33 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmg20aQ9DC33 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmg20aQ9DC33 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmg20aQ9DC33 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hmg20aQ9DC33 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmg20aQ9DC33 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmg20aQ9DC33 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Hmg20aQ9DC33 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.33■□□□□ 0.2
Hmg20aQ9DC33 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hmg20aQ9DC33 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.33■□□□□ 0.2
Hmg20aQ9DC33 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmg20aQ9DC33 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmg20aQ9DC33 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmg20aQ9DC33 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmg20aQ9DC33 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hmg20aQ9DC33 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmg20aQ9DC33 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmg20aQ9DC33 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmg20aQ9DC33 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmg20aQ9DC33 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmg20aQ9DC33 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.32■□□□□ 0.2
Hmg20aQ9DC33 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmg20aQ9DC33 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmg20aQ9DC33 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmg20aQ9DC33 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmg20aQ9DC33 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hmg20aQ9DC33 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms