Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rrp8Q9DB85 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.52■□□□□ 0.39
Rrp8Q9DB85 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Rrp8Q9DB85 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rrp8Q9DB85 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.52■□□□□ 0.39
Rrp8Q9DB85 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rrp8Q9DB85 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Mir5130-201ENSMUST00000175160 84 ntBASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Gm2274-201ENSMUST00000184539 609 ntBASIC17.51■□□□□ 0.39
Rrp8Q9DB85 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrp8Q9DB85 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 AA414768-201ENSMUST00000121924 1257 ntBASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrp8Q9DB85 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rrp8Q9DB85 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rrp8Q9DB85 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrp8Q9DB85 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrp8Q9DB85 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrp8Q9DB85 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rrp8Q9DB85 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rrp8Q9DB85 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rrp8Q9DB85 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrp8Q9DB85 Gm38027-201ENSMUST00000192315 235 ntBASIC17.49■□□□□ 0.39
Rrp8Q9DB85 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.49■□□□□ 0.39
Rrp8Q9DB85 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrp8Q9DB85 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rrp8Q9DB85 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rrp8Q9DB85 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Gm18032-201ENSMUST00000222541 538 ntBASIC17.48■□□□□ 0.39
Rrp8Q9DB85 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rrp8Q9DB85 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Rrp8Q9DB85 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.47■□□□□ 0.39
Rrp8Q9DB85 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.47■□□□□ 0.39
Rrp8Q9DB85 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rrp8Q9DB85 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.47■□□□□ 0.39
Rrp8Q9DB85 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rrp8Q9DB85 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rrp8Q9DB85 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Rrp8Q9DB85 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rrp8Q9DB85 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rrp8Q9DB85 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rrp8Q9DB85 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.47■□□□□ 0.39
Rrp8Q9DB85 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rrp8Q9DB85 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rrp8Q9DB85 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rrp8Q9DB85 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms