Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.66■□□□□ 0.58
Chmp2aQ9DB34 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2aQ9DB34 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2aQ9DB34 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2aQ9DB34 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2aQ9DB34 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Chmp2aQ9DB34 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2aQ9DB34 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2aQ9DB34 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Chmp2aQ9DB34 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp2aQ9DB34 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chmp2aQ9DB34 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2aQ9DB34 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Chmp2aQ9DB34 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.64■□□□□ 0.57
Chmp2aQ9DB34 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2aQ9DB34 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.64■□□□□ 0.57
Chmp2aQ9DB34 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2aQ9DB34 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Chmp2aQ9DB34 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2aQ9DB34 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2aQ9DB34 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp2aQ9DB34 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2aQ9DB34 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2aQ9DB34 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2aQ9DB34 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.63■□□□□ 0.57
Chmp2aQ9DB34 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2aQ9DB34 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2aQ9DB34 Gm11249-201ENSMUST00000117071 859 ntBASIC18.63■□□□□ 0.57
Chmp2aQ9DB34 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2aQ9DB34 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Chmp2aQ9DB34 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.63■□□□□ 0.57
Chmp2aQ9DB34 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2aQ9DB34 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2aQ9DB34 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2aQ9DB34 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2aQ9DB34 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Chmp2aQ9DB34 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2aQ9DB34 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Chmp2aQ9DB34 Gm11927-201ENSMUST00000118472 759 ntBASIC18.62■□□□□ 0.57
Chmp2aQ9DB34 Mtag2-201ENSMUST00000058665 714 ntBASIC18.62■□□□□ 0.57
Chmp2aQ9DB34 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2aQ9DB34 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2aQ9DB34 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2aQ9DB34 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Chmp2aQ9DB34 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2aQ9DB34 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2aQ9DB34 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2aQ9DB34 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2aQ9DB34 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2aQ9DB34 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2aQ9DB34 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2aQ9DB34 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2aQ9DB34 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2aQ9DB34 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2aQ9DB34 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2aQ9DB34 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2aQ9DB34 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2aQ9DB34 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2aQ9DB34 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2aQ9DB34 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2aQ9DB34 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2aQ9DB34 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2aQ9DB34 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2aQ9DB34 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2aQ9DB34 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Chmp2aQ9DB34 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2aQ9DB34 Zfp783-201ENSMUST00000095946 670 ntBASIC18.59■□□□□ 0.57
Chmp2aQ9DB34 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2aQ9DB34 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Chmp2aQ9DB34 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2aQ9DB34 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2aQ9DB34 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2aQ9DB34 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2aQ9DB34 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms