Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc7Q9D541 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc7Q9D541 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc7Q9D541 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ccdc7Q9D541 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.91■□□□□ 0.94
Ccdc7Q9D541 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Ccdc7Q9D541 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.91■□□□□ 0.94
Ccdc7Q9D541 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ccdc7Q9D541 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.91■□□□□ 0.94
Ccdc7Q9D541 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc7Q9D541 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc7Q9D541 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc7Q9D541 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc7Q9D541 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ccdc7Q9D541 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ccdc7Q9D541 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc7Q9D541 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.91■□□□□ 0.94
Ccdc7Q9D541 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc7Q9D541 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ccdc7Q9D541 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ccdc7Q9D541 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc7Q9D541 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.9■□□□□ 0.94
Ccdc7Q9D541 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc7Q9D541 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc7Q9D541 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.9■□□□□ 0.94
Ccdc7Q9D541 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc7Q9D541 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc7Q9D541 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.9■□□□□ 0.94
Ccdc7Q9D541 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.9■□□□□ 0.94
Ccdc7Q9D541 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.9■□□□□ 0.94
Ccdc7Q9D541 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc7Q9D541 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc7Q9D541 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc7Q9D541 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc7Q9D541 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc7Q9D541 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc7Q9D541 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc7Q9D541 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc7Q9D541 Mir8112-201ENSMUST00000184382 131 ntBASIC20.89■□□□□ 0.93
Ccdc7Q9D541 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc7Q9D541 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc7Q9D541 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc7Q9D541 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc7Q9D541 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc7Q9D541 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.88■□□□□ 0.93
Ccdc7Q9D541 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc7Q9D541 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc7Q9D541 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc7Q9D541 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc7Q9D541 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc7Q9D541 Gm42569-201ENSMUST00000200539 472 ntBASIC20.88■□□□□ 0.93
Ccdc7Q9D541 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.88■□□□□ 0.93
Ccdc7Q9D541 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ccdc7Q9D541 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc7Q9D541 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc7Q9D541 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc7Q9D541 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc7Q9D541 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ccdc7Q9D541 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc7Q9D541 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc7Q9D541 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc7Q9D541 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc7Q9D541 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc7Q9D541 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc7Q9D541 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc7Q9D541 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.87■□□□□ 0.93
Ccdc7Q9D541 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc7Q9D541 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms