Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Idnk-204ENSMUST00000226010 1898 ntBASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.41■□□□□ 0.54
Ddx47Q9CWX9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.4■□□□□ 0.54
Ddx47Q9CWX9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
Ddx47Q9CWX9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ddx47Q9CWX9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Ddx47Q9CWX9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx47Q9CWX9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx47Q9CWX9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ddx47Q9CWX9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx47Q9CWX9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx47Q9CWX9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx47Q9CWX9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.39■□□□□ 0.53
Ddx47Q9CWX9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx47Q9CWX9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx47Q9CWX9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx47Q9CWX9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ddx47Q9CWX9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx47Q9CWX9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx47Q9CWX9 Haglr-201ENSMUST00000100000 2085 ntBASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx47Q9CWX9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx47Q9CWX9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx47Q9CWX9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx47Q9CWX9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx47Q9CWX9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx47Q9CWX9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms