Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim11Q99PQ2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim11Q99PQ2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim11Q99PQ2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim11Q99PQ2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim11Q99PQ2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Trim11Q99PQ2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim11Q99PQ2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trim11Q99PQ2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim11Q99PQ2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim11Q99PQ2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim11Q99PQ2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim11Q99PQ2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim11Q99PQ2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim11Q99PQ2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim11Q99PQ2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim11Q99PQ2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim11Q99PQ2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.35■□□□□ 0.85
Trim11Q99PQ2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim11Q99PQ2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.35■□□□□ 0.85
Trim11Q99PQ2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Trim11Q99PQ2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim11Q99PQ2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim11Q99PQ2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim11Q99PQ2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim11Q99PQ2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim11Q99PQ2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim11Q99PQ2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim11Q99PQ2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim11Q99PQ2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim11Q99PQ2 Gm2399-201ENSMUST00000104944 225 ntBASIC20.34■□□□□ 0.85
Trim11Q99PQ2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim11Q99PQ2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trim11Q99PQ2 Mir5133-201ENSMUST00000174955 77 ntBASIC20.34■□□□□ 0.85
Trim11Q99PQ2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim11Q99PQ2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim11Q99PQ2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim11Q99PQ2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim11Q99PQ2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim11Q99PQ2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim11Q99PQ2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.33■□□□□ 0.85
Trim11Q99PQ2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim11Q99PQ2 Gm13148-201ENSMUST00000118892 745 ntBASIC20.33■□□□□ 0.85
Trim11Q99PQ2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.33■□□□□ 0.85
Trim11Q99PQ2 Gm26524-201ENSMUST00000192339 390 ntBASIC20.33■□□□□ 0.85
Trim11Q99PQ2 Gm44549-201ENSMUST00000208351 577 ntBASIC20.33■□□□□ 0.85
Trim11Q99PQ2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trim11Q99PQ2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim11Q99PQ2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim11Q99PQ2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trim11Q99PQ2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim11Q99PQ2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim11Q99PQ2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.33■□□□□ 0.84
Trim11Q99PQ2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim11Q99PQ2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim11Q99PQ2 Gm8969-201ENSMUST00000199694 526 ntBASIC20.32■□□□□ 0.84
Trim11Q99PQ2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.32■□□□□ 0.84
Trim11Q99PQ2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim11Q99PQ2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trim11Q99PQ2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trim11Q99PQ2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trim11Q99PQ2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.32■□□□□ 0.84
Trim11Q99PQ2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim11Q99PQ2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trim11Q99PQ2 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.31■□□□□ 0.84
Trim11Q99PQ2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim11Q99PQ2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim11Q99PQ2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim11Q99PQ2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Trim11Q99PQ2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim11Q99PQ2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trim11Q99PQ2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim11Q99PQ2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim11Q99PQ2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim11Q99PQ2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.31■□□□□ 0.84
Trim11Q99PQ2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim11Q99PQ2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim11Q99PQ2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim11Q99PQ2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim11Q99PQ2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim11Q99PQ2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim11Q99PQ2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Trim11Q99PQ2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim11Q99PQ2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim11Q99PQ2 Gm38285-201ENSMUST00000192928 922 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms