Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Gm7461-201ENSMUST00000058918 827 ntBASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cstf1Q99LC2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cstf1Q99LC2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cstf1Q99LC2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cstf1Q99LC2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Cstf1Q99LC2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cstf1Q99LC2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Cstf1Q99LC2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cstf1Q99LC2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.8■□□□□ 0.44
Cstf1Q99LC2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cstf1Q99LC2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cstf1Q99LC2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cstf1Q99LC2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cstf1Q99LC2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.8■□□□□ 0.44
Cstf1Q99LC2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Gm17661-201ENSMUST00000170317 270 ntBASIC17.79■□□□□ 0.44
Cstf1Q99LC2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Gm17971-201ENSMUST00000190239 806 ntBASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cstf1Q99LC2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cstf1Q99LC2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cstf1Q99LC2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cstf1Q99LC2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cstf1Q99LC2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cstf1Q99LC2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Cstf1Q99LC2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cstf1Q99LC2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.78■□□□□ 0.44
Cstf1Q99LC2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cstf1Q99LC2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cstf1Q99LC2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cstf1Q99LC2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cstf1Q99LC2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cstf1Q99LC2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cstf1Q99LC2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cstf1Q99LC2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.77■□□□□ 0.44
Cstf1Q99LC2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cstf1Q99LC2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cstf1Q99LC2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cstf1Q99LC2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cstf1Q99LC2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cstf1Q99LC2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cstf1Q99LC2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cstf1Q99LC2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cstf1Q99LC2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.77■□□□□ 0.44
Cstf1Q99LC2 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.77■□□□□ 0.44
Cstf1Q99LC2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cstf1Q99LC2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms