Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smarcd2Q99JR8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.08■□□□□ 0.48
Smarcd2Q99JR8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.08■□□□□ 0.48
Smarcd2Q99JR8 Gm6345-202ENSMUST00000180900 204 ntBASIC18.08■□□□□ 0.48
Smarcd2Q99JR8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smarcd2Q99JR8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smarcd2Q99JR8 Gm18101-201ENSMUST00000215769 548 ntBASIC18.08■□□□□ 0.48
Smarcd2Q99JR8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smarcd2Q99JR8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smarcd2Q99JR8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smarcd2Q99JR8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smarcd2Q99JR8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Gm10418-201ENSMUST00000100943 576 ntBASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Notumos-201ENSMUST00000151998 2659 ntBASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smarcd2Q99JR8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcd2Q99JR8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcd2Q99JR8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcd2Q99JR8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcd2Q99JR8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Smarcd2Q99JR8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Smarcd2Q99JR8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.06■□□□□ 0.48
Smarcd2Q99JR8 Gm22697-201ENSMUST00000175194 63 ntBASIC18.06■□□□□ 0.48
Smarcd2Q99JR8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.06■□□□□ 0.48
Smarcd2Q99JR8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcd2Q99JR8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcd2Q99JR8 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.06■□□□□ 0.48
Smarcd2Q99JR8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smarcd2Q99JR8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Smarcd2Q99JR8 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.05■□□□□ 0.48
Smarcd2Q99JR8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcd2Q99JR8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcd2Q99JR8 Gm33142-201ENSMUST00000193913 867 ntBASIC18.05■□□□□ 0.48
Smarcd2Q99JR8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.05■□□□□ 0.48
Smarcd2Q99JR8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcd2Q99JR8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcd2Q99JR8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcd2Q99JR8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarcd2Q99JR8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.05■□□□□ 0.48
Smarcd2Q99JR8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Smarcd2Q99JR8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Smarcd2Q99JR8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Smarcd2Q99JR8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcd2Q99JR8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcd2Q99JR8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcd2Q99JR8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Smarcd2Q99JR8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcd2Q99JR8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.04■□□□□ 0.48
Smarcd2Q99JR8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Smarcd2Q99JR8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.04■□□□□ 0.48
Smarcd2Q99JR8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcd2Q99JR8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcd2Q99JR8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcd2Q99JR8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarcd2Q99JR8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Smarcd2Q99JR8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.04■□□□□ 0.48
Smarcd2Q99JR8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd2Q99JR8 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.03■□□□□ 0.48
Smarcd2Q99JR8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd2Q99JR8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd2Q99JR8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd2Q99JR8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd2Q99JR8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd2Q99JR8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Smarcd2Q99JR8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd2Q99JR8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd2Q99JR8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd2Q99JR8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarcd2Q99JR8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms