Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb1Q91Y08 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb1Q91Y08 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb1Q91Y08 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb1Q91Y08 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb1Q91Y08 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb1Q91Y08 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb1Q91Y08 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb1Q91Y08 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb1Q91Y08 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb1Q91Y08 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Pcdhb1Q91Y08 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb1Q91Y08 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb1Q91Y08 Gm11927-201ENSMUST00000118472 759 ntBASIC18.58■□□□□ 0.56
Pcdhb1Q91Y08 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.58■□□□□ 0.56
Pcdhb1Q91Y08 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.58■□□□□ 0.56
Pcdhb1Q91Y08 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb1Q91Y08 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Pcdhb1Q91Y08 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Pcdhb1Q91Y08 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb1Q91Y08 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb1Q91Y08 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb1Q91Y08 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb1Q91Y08 Idnk-204ENSMUST00000226010 1898 ntBASIC18.57■□□□□ 0.56
Pcdhb1Q91Y08 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb1Q91Y08 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.57■□□□□ 0.56
Pcdhb1Q91Y08 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb1Q91Y08 Gm2559-201ENSMUST00000201323 363 ntBASIC18.57■□□□□ 0.56
Pcdhb1Q91Y08 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb1Q91Y08 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhb1Q91Y08 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb1Q91Y08 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb1Q91Y08 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb1Q91Y08 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb1Q91Y08 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Gm4968-201ENSMUST00000071458 858 ntBASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb1Q91Y08 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb1Q91Y08 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb1Q91Y08 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb1Q91Y08 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhb1Q91Y08 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb1Q91Y08 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.54■□□□□ 0.56
Pcdhb1Q91Y08 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.54■□□□□ 0.56
Pcdhb1Q91Y08 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhb1Q91Y08 Gm8969-201ENSMUST00000199694 526 ntBASIC18.54■□□□□ 0.56
Pcdhb1Q91Y08 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.54■□□□□ 0.56
Pcdhb1Q91Y08 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb1Q91Y08 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhb1Q91Y08 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms