Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb6Q91XZ4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb6Q91XZ4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb6Q91XZ4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb6Q91XZ4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb6Q91XZ4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb6Q91XZ4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcdhb6Q91XZ4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdhb6Q91XZ4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb6Q91XZ4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb6Q91XZ4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb6Q91XZ4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb6Q91XZ4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Pcdhb6Q91XZ4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb6Q91XZ4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb6Q91XZ4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb6Q91XZ4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb6Q91XZ4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb6Q91XZ4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb6Q91XZ4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb6Q91XZ4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb6Q91XZ4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb6Q91XZ4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb6Q91XZ4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb6Q91XZ4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdhb6Q91XZ4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb6Q91XZ4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb6Q91XZ4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdhb6Q91XZ4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb6Q91XZ4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb6Q91XZ4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb6Q91XZ4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb6Q91XZ4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb6Q91XZ4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Pcdhb6Q91XZ4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb6Q91XZ4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb6Q91XZ4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb6Q91XZ4 Mir2861-201ENSMUST00000175539 82 ntBASIC18.37■□□□□ 0.53
Pcdhb6Q91XZ4 Gm8969-201ENSMUST00000199694 526 ntBASIC18.37■□□□□ 0.53
Pcdhb6Q91XZ4 Mtag2-201ENSMUST00000058665 714 ntBASIC18.37■□□□□ 0.53
Pcdhb6Q91XZ4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhb6Q91XZ4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb6Q91XZ4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb6Q91XZ4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhb6Q91XZ4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb6Q91XZ4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb6Q91XZ4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb6Q91XZ4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb6Q91XZ4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.36■□□□□ 0.53
Pcdhb6Q91XZ4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb6Q91XZ4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb6Q91XZ4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb6Q91XZ4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb6Q91XZ4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb6Q91XZ4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb6Q91XZ4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb6Q91XZ4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb6Q91XZ4 Gm12896-201ENSMUST00000118430 226 ntBASIC18.35■□□□□ 0.53
Pcdhb6Q91XZ4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhb6Q91XZ4 Gm12441-201ENSMUST00000121806 588 ntBASIC18.35■□□□□ 0.53
Pcdhb6Q91XZ4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhb6Q91XZ4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdhb6Q91XZ4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb6Q91XZ4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb6Q91XZ4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb6Q91XZ4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb6Q91XZ4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb6Q91XZ4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb6Q91XZ4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb6Q91XZ4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb6Q91XZ4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb6Q91XZ4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhb6Q91XZ4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhb6Q91XZ4 Gm11249-201ENSMUST00000117071 859 ntBASIC18.34■□□□□ 0.53
Pcdhb6Q91XZ4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb6Q91XZ4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb6Q91XZ4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhb6Q91XZ4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb6Q91XZ4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb6Q91XZ4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb6Q91XZ4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Pcdhb6Q91XZ4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb6Q91XZ4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb6Q91XZ4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb6Q91XZ4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb6Q91XZ4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb6Q91XZ4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb6Q91XZ4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhb6Q91XZ4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.32■□□□□ 0.52
Pcdhb6Q91XZ4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb6Q91XZ4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb6Q91XZ4 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.32■□□□□ 0.52
Pcdhb6Q91XZ4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb6Q91XZ4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb6Q91XZ4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb6Q91XZ4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdhb6Q91XZ4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb6Q91XZ4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb6Q91XZ4 Gm20049-201ENSMUST00000219950 730 ntBASIC18.32■□□□□ 0.52
Pcdhb6Q91XZ4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms