Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm27463-201ENSMUST00000183569 57 ntBASIC20.54■□□□□ 0.88
Trex1Q91XB0 Gm18959-201ENSMUST00000208954 655 ntBASIC20.54■□□□□ 0.88
Trex1Q91XB0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trex1Q91XB0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trex1Q91XB0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trex1Q91XB0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.54■□□□□ 0.88
Trex1Q91XB0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trex1Q91XB0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trex1Q91XB0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trex1Q91XB0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trex1Q91XB0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trex1Q91XB0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trex1Q91XB0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.53■□□□□ 0.88
Trex1Q91XB0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.53■□□□□ 0.88
Trex1Q91XB0 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.53■□□□□ 0.88
Trex1Q91XB0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trex1Q91XB0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trex1Q91XB0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.53■□□□□ 0.88
Trex1Q91XB0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trex1Q91XB0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Trex1Q91XB0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trex1Q91XB0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trex1Q91XB0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trex1Q91XB0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trex1Q91XB0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trex1Q91XB0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trex1Q91XB0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.52■□□□□ 0.88
Trex1Q91XB0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trex1Q91XB0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trex1Q91XB0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trex1Q91XB0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Trex1Q91XB0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trex1Q91XB0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trex1Q91XB0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trex1Q91XB0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trex1Q91XB0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trex1Q91XB0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trex1Q91XB0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trex1Q91XB0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trex1Q91XB0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Trex1Q91XB0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.51■□□□□ 0.87
Trex1Q91XB0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trex1Q91XB0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trex1Q91XB0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trex1Q91XB0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trex1Q91XB0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trex1Q91XB0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trex1Q91XB0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trex1Q91XB0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trex1Q91XB0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Trex1Q91XB0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
Trex1Q91XB0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.5■□□□□ 0.87
Trex1Q91XB0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trex1Q91XB0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.5■□□□□ 0.87
Trex1Q91XB0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.5■□□□□ 0.87
Trex1Q91XB0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.5■□□□□ 0.87
Trex1Q91XB0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.5■□□□□ 0.87
Trex1Q91XB0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.5■□□□□ 0.87
Trex1Q91XB0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trex1Q91XB0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Trex1Q91XB0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trex1Q91XB0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trex1Q91XB0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trex1Q91XB0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trex1Q91XB0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trex1Q91XB0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trex1Q91XB0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trex1Q91XB0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trex1Q91XB0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.49■□□□□ 0.87
Trex1Q91XB0 Gm13401-201ENSMUST00000117074 291 ntBASIC20.49■□□□□ 0.87
Trex1Q91XB0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.49■□□□□ 0.87
Trex1Q91XB0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trex1Q91XB0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trex1Q91XB0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trex1Q91XB0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trex1Q91XB0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trex1Q91XB0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trex1Q91XB0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trex1Q91XB0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trex1Q91XB0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trex1Q91XB0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trex1Q91XB0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.48■□□□□ 0.87
Trex1Q91XB0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trex1Q91XB0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trex1Q91XB0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trex1Q91XB0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trex1Q91XB0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trex1Q91XB0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trex1Q91XB0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trex1Q91XB0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trex1Q91XB0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trex1Q91XB0 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.47■□□□□ 0.87
Trex1Q91XB0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trex1Q91XB0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trex1Q91XB0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trex1Q91XB0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trex1Q91XB0 Gm45058-201ENSMUST00000205810 766 ntBASIC20.47■□□□□ 0.87
Trex1Q91XB0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trex1Q91XB0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trex1Q91XB0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms