Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snx9Q91VH2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Snx9Q91VH2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Snx9Q91VH2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Snx9Q91VH2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Snx9Q91VH2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Snx9Q91VH2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx9Q91VH2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Snx9Q91VH2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.76■□□□□ 0.59
Snx9Q91VH2 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.76■□□□□ 0.59
Snx9Q91VH2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Snx9Q91VH2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx9Q91VH2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx9Q91VH2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snx9Q91VH2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.76■□□□□ 0.59
Snx9Q91VH2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.76■□□□□ 0.59
Snx9Q91VH2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Snx9Q91VH2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snx9Q91VH2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snx9Q91VH2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snx9Q91VH2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Snx9Q91VH2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snx9Q91VH2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Snx9Q91VH2 Gm18025-201ENSMUST00000221733 862 ntBASIC18.75■□□□□ 0.59
Snx9Q91VH2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snx9Q91VH2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Snx9Q91VH2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snx9Q91VH2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snx9Q91VH2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.74■□□□□ 0.59
Snx9Q91VH2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snx9Q91VH2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.74■□□□□ 0.59
Snx9Q91VH2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Snx9Q91VH2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snx9Q91VH2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.74■□□□□ 0.59
Snx9Q91VH2 Gm42545-201ENSMUST00000202755 922 ntBASIC18.74■□□□□ 0.59
Snx9Q91VH2 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.74■□□□□ 0.59
Snx9Q91VH2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snx9Q91VH2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Snx9Q91VH2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snx9Q91VH2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snx9Q91VH2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Snx9Q91VH2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snx9Q91VH2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snx9Q91VH2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snx9Q91VH2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.73■□□□□ 0.59
Snx9Q91VH2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snx9Q91VH2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Snx9Q91VH2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Snx9Q91VH2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Snx9Q91VH2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snx9Q91VH2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snx9Q91VH2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Snx9Q91VH2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.72■□□□□ 0.59
Snx9Q91VH2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.72■□□□□ 0.59
Snx9Q91VH2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snx9Q91VH2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.72■□□□□ 0.59
Snx9Q91VH2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snx9Q91VH2 Fst-202ENSMUST00000223640 2612 ntBASIC18.71■□□□□ 0.59
Snx9Q91VH2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snx9Q91VH2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
Snx9Q91VH2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Snx9Q91VH2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.71■□□□□ 0.59
Snx9Q91VH2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snx9Q91VH2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snx9Q91VH2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snx9Q91VH2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snx9Q91VH2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.71■□□□□ 0.59
Snx9Q91VH2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snx9Q91VH2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snx9Q91VH2 Mir2861-201ENSMUST00000175539 82 ntBASIC18.71■□□□□ 0.59
Snx9Q91VH2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.71■□□□□ 0.59
Snx9Q91VH2 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.71■□□□□ 0.59
Snx9Q91VH2 Gm43183-201ENSMUST00000200632 547 ntBASIC18.71■□□□□ 0.59
Snx9Q91VH2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snx9Q91VH2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snx9Q91VH2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Snx9Q91VH2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snx9Q91VH2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.71■□□□□ 0.59
Snx9Q91VH2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snx9Q91VH2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snx9Q91VH2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snx9Q91VH2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms