Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc44a4Q91VA1 Mir5130-201ENSMUST00000175160 84 ntBASIC21.13■□□□□ 0.97
Slc44a4Q91VA1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc44a4Q91VA1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Gm10013-201ENSMUST00000106074 672 ntBASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Gm6345-202ENSMUST00000180900 204 ntBASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc44a4Q91VA1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Slc44a4Q91VA1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
Slc44a4Q91VA1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc44a4Q91VA1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc44a4Q91VA1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc44a4Q91VA1 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.11■□□□□ 0.97
Slc44a4Q91VA1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.11■□□□□ 0.97
Slc44a4Q91VA1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc44a4Q91VA1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc44a4Q91VA1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.11■□□□□ 0.97
Slc44a4Q91VA1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Slc44a4Q91VA1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Slc44a4Q91VA1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc44a4Q91VA1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc44a4Q91VA1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc44a4Q91VA1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Slc44a4Q91VA1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc44a4Q91VA1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.1■□□□□ 0.97
Slc44a4Q91VA1 Gm2274-201ENSMUST00000184539 609 ntBASIC21.1■□□□□ 0.97
Slc44a4Q91VA1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.1■□□□□ 0.97
Slc44a4Q91VA1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc44a4Q91VA1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC21.1■□□□□ 0.97
Slc44a4Q91VA1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc44a4Q91VA1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc44a4Q91VA1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc44a4Q91VA1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.09■□□□□ 0.97
Slc44a4Q91VA1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.09■□□□□ 0.97
Slc44a4Q91VA1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.09■□□□□ 0.97
Slc44a4Q91VA1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc44a4Q91VA1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Slc44a4Q91VA1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc44a4Q91VA1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Slc44a4Q91VA1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc44a4Q91VA1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc44a4Q91VA1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Slc44a4Q91VA1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc44a4Q91VA1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc44a4Q91VA1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc44a4Q91VA1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc44a4Q91VA1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc44a4Q91VA1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Slc44a4Q91VA1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc44a4Q91VA1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Slc44a4Q91VA1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Slc44a4Q91VA1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Slc44a4Q91VA1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Slc44a4Q91VA1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC21.08■□□□□ 0.97
Slc44a4Q91VA1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Slc44a4Q91VA1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Slc44a4Q91VA1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc44a4Q91VA1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc44a4Q91VA1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Slc44a4Q91VA1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Slc44a4Q91VA1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc44a4Q91VA1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc44a4Q91VA1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Slc44a4Q91VA1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Slc44a4Q91VA1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc44a4Q91VA1 AA414768-201ENSMUST00000121924 1257 ntBASIC21.07■□□□□ 0.96
Slc44a4Q91VA1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.07■□□□□ 0.96
Slc44a4Q91VA1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc44a4Q91VA1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc44a4Q91VA1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc44a4Q91VA1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc44a4Q91VA1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc44a4Q91VA1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc44a4Q91VA1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.06■□□□□ 0.96
Slc44a4Q91VA1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc44a4Q91VA1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slc44a4Q91VA1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Slc44a4Q91VA1 Gm24841-201ENSMUST00000158676 357 ntBASIC21.06■□□□□ 0.96
Slc44a4Q91VA1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc44a4Q91VA1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms