Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Gm21814-202ENSMUST00000203277 873 ntBASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Gm9987-201ENSMUST00000069768 567 ntBASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr1Q8VHP6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr1Q8VHP6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr1Q8VHP6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr1Q8VHP6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr1Q8VHP6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr1Q8VHP6 Mir2861-201ENSMUST00000175539 82 ntBASIC17.43■□□□□ 0.38
Cdhr1Q8VHP6 Gm43799-201ENSMUST00000201845 579 ntBASIC17.43■□□□□ 0.38
Cdhr1Q8VHP6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.43■□□□□ 0.38
Cdhr1Q8VHP6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.43■□□□□ 0.38
Cdhr1Q8VHP6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr1Q8VHP6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr1Q8VHP6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cdhr1Q8VHP6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cdhr1Q8VHP6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr1Q8VHP6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cdhr1Q8VHP6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr1Q8VHP6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdhr1Q8VHP6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdhr1Q8VHP6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdhr1Q8VHP6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cdhr1Q8VHP6 Gm11643-201ENSMUST00000119578 864 ntBASIC17.41■□□□□ 0.38
Cdhr1Q8VHP6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdhr1Q8VHP6 Gm30025-201ENSMUST00000218555 728 ntBASIC17.41■□□□□ 0.38
Cdhr1Q8VHP6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdhr1Q8VHP6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdhr1Q8VHP6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cdhr1Q8VHP6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cdhr1Q8VHP6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Timm23-208ENSMUST00000226683 750 ntBASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdhr1Q8VHP6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cdhr1Q8VHP6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cdhr1Q8VHP6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms