Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vps4aQ8VEJ9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps4aQ8VEJ9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.34■□□□□ 0.37
Vps4aQ8VEJ9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.34■□□□□ 0.37
Vps4aQ8VEJ9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps4aQ8VEJ9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps4aQ8VEJ9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps4aQ8VEJ9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps4aQ8VEJ9 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.33■□□□□ 0.37
Vps4aQ8VEJ9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.33■□□□□ 0.37
Vps4aQ8VEJ9 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.33■□□□□ 0.37
Vps4aQ8VEJ9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.33■□□□□ 0.37
Vps4aQ8VEJ9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps4aQ8VEJ9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Vps4aQ8VEJ9 Fst-202ENSMUST00000223640 2612 ntBASIC17.33■□□□□ 0.36
Vps4aQ8VEJ9 Gm13148-201ENSMUST00000118892 745 ntBASIC17.33■□□□□ 0.36
Vps4aQ8VEJ9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.33■□□□□ 0.36
Vps4aQ8VEJ9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vps4aQ8VEJ9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps4aQ8VEJ9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps4aQ8VEJ9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4aQ8VEJ9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 Gm13146-201ENSMUST00000118508 780 ntBASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4aQ8VEJ9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4aQ8VEJ9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4aQ8VEJ9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4aQ8VEJ9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.3■□□□□ 0.36
Vps4aQ8VEJ9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4aQ8VEJ9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4aQ8VEJ9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4aQ8VEJ9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.3■□□□□ 0.36
Vps4aQ8VEJ9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Vps4aQ8VEJ9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Vps4aQ8VEJ9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4aQ8VEJ9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4aQ8VEJ9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4aQ8VEJ9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Vps4aQ8VEJ9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4aQ8VEJ9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4aQ8VEJ9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4aQ8VEJ9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Vps4aQ8VEJ9 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.29■□□□□ 0.36
Vps4aQ8VEJ9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4aQ8VEJ9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4aQ8VEJ9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.29■□□□□ 0.36
Vps4aQ8VEJ9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4aQ8VEJ9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.29■□□□□ 0.36
Vps4aQ8VEJ9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 Trmt13-210ENSMUST00000198454 880 ntBASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4aQ8VEJ9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4aQ8VEJ9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4aQ8VEJ9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms