Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Mir2861-201ENSMUST00000175539 82 ntBASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rpap2Q8VC34 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap2Q8VC34 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap2Q8VC34 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap2Q8VC34 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.62■□□□□ 0.73
Rpap2Q8VC34 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.62■□□□□ 0.73
Rpap2Q8VC34 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap2Q8VC34 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap2Q8VC34 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap2Q8VC34 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.62■□□□□ 0.73
Rpap2Q8VC34 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap2Q8VC34 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap2Q8VC34 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rpap2Q8VC34 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap2Q8VC34 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap2Q8VC34 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.61■□□□□ 0.73
Rpap2Q8VC34 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap2Q8VC34 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.61■□□□□ 0.73
Rpap2Q8VC34 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap2Q8VC34 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.61■□□□□ 0.73
Rpap2Q8VC34 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Rpap2Q8VC34 Gm13158-201ENSMUST00000122007 736 ntBASIC19.61■□□□□ 0.73
Rpap2Q8VC34 Mir6349-201ENSMUST00000184059 97 ntBASIC19.61■□□□□ 0.73
Rpap2Q8VC34 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.61■□□□□ 0.73
Rpap2Q8VC34 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap2Q8VC34 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Rpap2Q8VC34 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap2Q8VC34 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.6■□□□□ 0.73
Rpap2Q8VC34 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap2Q8VC34 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap2Q8VC34 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.6■□□□□ 0.73
Rpap2Q8VC34 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap2Q8VC34 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap2Q8VC34 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap2Q8VC34 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap2Q8VC34 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap2Q8VC34 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap2Q8VC34 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap2Q8VC34 Idnk-204ENSMUST00000226010 1898 ntBASIC19.6■□□□□ 0.73
Rpap2Q8VC34 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap2Q8VC34 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rpap2Q8VC34 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap2Q8VC34 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap2Q8VC34 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap2Q8VC34 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
Rpap2Q8VC34 Trmt13-210ENSMUST00000198454 880 ntBASIC19.59■□□□□ 0.73
Rpap2Q8VC34 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap2Q8VC34 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap2Q8VC34 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap2Q8VC34 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap2Q8VC34 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap2Q8VC34 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap2Q8VC34 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap2Q8VC34 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap2Q8VC34 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rpap2Q8VC34 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rpap2Q8VC34 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpap2Q8VC34 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpap2Q8VC34 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Rpap2Q8VC34 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpap2Q8VC34 Gm15375-201ENSMUST00000119510 849 ntBASIC19.58■□□□□ 0.72
Rpap2Q8VC34 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.58■□□□□ 0.72
Rpap2Q8VC34 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpap2Q8VC34 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Rpap2Q8VC34 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Rpap2Q8VC34 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rpap2Q8VC34 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpap2Q8VC34 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.58■□□□□ 0.72
Rpap2Q8VC34 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpap2Q8VC34 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms