Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Gm18666-201ENSMUST00000190039 958 ntBASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Gm5643-201ENSMUST00000117081 966 ntBASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Gm22240-201ENSMUST00000175225 82 ntBASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r28Q8R2C9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r28Q8R2C9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r28Q8R2C9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r28Q8R2C9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Vmn1r28Q8R2C9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.4■□□□□ 0.22
Vmn1r28Q8R2C9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.4■□□□□ 0.22
Vmn1r28Q8R2C9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r28Q8R2C9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r28Q8R2C9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r28Q8R2C9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r28Q8R2C9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r28Q8R2C9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r28Q8R2C9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Vmn1r28Q8R2C9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r28Q8R2C9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r28Q8R2C9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r28Q8R2C9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r28Q8R2C9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r28Q8R2C9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Vmn1r28Q8R2C9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.38■□□□□ 0.21
Vmn1r28Q8R2C9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.38■□□□□ 0.21
Vmn1r28Q8R2C9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.38■□□□□ 0.21
Vmn1r28Q8R2C9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.38■□□□□ 0.21
Vmn1r28Q8R2C9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
Vmn1r28Q8R2C9 Gm10138-203ENSMUST00000206952 366 ntBASIC16.38■□□□□ 0.21
Vmn1r28Q8R2C9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r28Q8R2C9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r28Q8R2C9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Vmn1r28Q8R2C9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vmn1r28Q8R2C9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vmn1r28Q8R2C9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vmn1r28Q8R2C9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms