Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Gm2559-201ENSMUST00000201323 363 ntBASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Atf7Q8R0S1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Atf7Q8R0S1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Atf7Q8R0S1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atf7Q8R0S1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Atf7Q8R0S1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.11■□□□□ 0.97
Atf7Q8R0S1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.11■□□□□ 0.97
Atf7Q8R0S1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atf7Q8R0S1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.11■□□□□ 0.97
Atf7Q8R0S1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.11■□□□□ 0.97
Atf7Q8R0S1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atf7Q8R0S1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atf7Q8R0S1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Atf7Q8R0S1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atf7Q8R0S1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atf7Q8R0S1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.1■□□□□ 0.97
Atf7Q8R0S1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Atf7Q8R0S1 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.1■□□□□ 0.97
Atf7Q8R0S1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atf7Q8R0S1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atf7Q8R0S1 Dio3-201ENSMUST00000097228 1449 ntBASIC21.1■□□□□ 0.97
Atf7Q8R0S1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atf7Q8R0S1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atf7Q8R0S1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Atf7Q8R0S1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atf7Q8R0S1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atf7Q8R0S1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atf7Q8R0S1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.09■□□□□ 0.97
Atf7Q8R0S1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Atf7Q8R0S1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atf7Q8R0S1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atf7Q8R0S1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atf7Q8R0S1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atf7Q8R0S1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atf7Q8R0S1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21.08■□□□□ 0.97
Atf7Q8R0S1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atf7Q8R0S1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atf7Q8R0S1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atf7Q8R0S1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atf7Q8R0S1 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.08■□□□□ 0.96
Atf7Q8R0S1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Atf7Q8R0S1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atf7Q8R0S1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Atf7Q8R0S1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf7Q8R0S1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf7Q8R0S1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atf7Q8R0S1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atf7Q8R0S1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atf7Q8R0S1 Mtag2-201ENSMUST00000058665 714 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms