Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cchcr1Q8K2I2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21.15■□□□□ 0.98
Cchcr1Q8K2I2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cchcr1Q8K2I2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cchcr1Q8K2I2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.14■□□□□ 0.98
Cchcr1Q8K2I2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cchcr1Q8K2I2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cchcr1Q8K2I2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cchcr1Q8K2I2 Gm6211-202ENSMUST00000167849 925 ntBASIC21.14■□□□□ 0.97
Cchcr1Q8K2I2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.14■□□□□ 0.97
Cchcr1Q8K2I2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cchcr1Q8K2I2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cchcr1Q8K2I2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Gm26571-201ENSMUST00000181399 666 ntBASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.13■□□□□ 0.97
Cchcr1Q8K2I2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cchcr1Q8K2I2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cchcr1Q8K2I2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cchcr1Q8K2I2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cchcr1Q8K2I2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cchcr1Q8K2I2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cchcr1Q8K2I2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.12■□□□□ 0.97
Cchcr1Q8K2I2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC21.12■□□□□ 0.97
Cchcr1Q8K2I2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cchcr1Q8K2I2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cchcr1Q8K2I2 Gm7291-201ENSMUST00000199147 382 ntBASIC21.12■□□□□ 0.97
Cchcr1Q8K2I2 Gm42569-201ENSMUST00000200539 472 ntBASIC21.12■□□□□ 0.97
Cchcr1Q8K2I2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cchcr1Q8K2I2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cchcr1Q8K2I2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 Gm19439-201ENSMUST00000198195 2273 ntBASIC21.11■□□□□ 0.97
Cchcr1Q8K2I2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Gm8495-201ENSMUST00000188740 694 ntBASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.1■□□□□ 0.97
Cchcr1Q8K2I2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cchcr1Q8K2I2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.09■□□□□ 0.97
Cchcr1Q8K2I2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cchcr1Q8K2I2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cchcr1Q8K2I2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cchcr1Q8K2I2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.09■□□□□ 0.97
Cchcr1Q8K2I2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cchcr1Q8K2I2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cchcr1Q8K2I2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cchcr1Q8K2I2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.09■□□□□ 0.97
Cchcr1Q8K2I2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cchcr1Q8K2I2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.08■□□□□ 0.97
Cchcr1Q8K2I2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cchcr1Q8K2I2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cchcr1Q8K2I2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.08■□□□□ 0.97
Cchcr1Q8K2I2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cchcr1Q8K2I2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.08■□□□□ 0.97
Cchcr1Q8K2I2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cchcr1Q8K2I2 Idnk-204ENSMUST00000226010 1898 ntBASIC21.08■□□□□ 0.97
Cchcr1Q8K2I2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cchcr1Q8K2I2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cchcr1Q8K2I2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms