Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Gm3375-201ENSMUST00000203929 796 ntBASIC18.79■□□□□ 0.6
Trim61Q8JZK6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim61Q8JZK6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim61Q8JZK6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim61Q8JZK6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim61Q8JZK6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim61Q8JZK6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim61Q8JZK6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim61Q8JZK6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim61Q8JZK6 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.79■□□□□ 0.6
Trim61Q8JZK6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trim61Q8JZK6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim61Q8JZK6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim61Q8JZK6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim61Q8JZK6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim61Q8JZK6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim61Q8JZK6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim61Q8JZK6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim61Q8JZK6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trim61Q8JZK6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim61Q8JZK6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.78■□□□□ 0.6
Trim61Q8JZK6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.78■□□□□ 0.6
Trim61Q8JZK6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.78■□□□□ 0.6
Trim61Q8JZK6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim61Q8JZK6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim61Q8JZK6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim61Q8JZK6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim61Q8JZK6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim61Q8JZK6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim61Q8JZK6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim61Q8JZK6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim61Q8JZK6 Gm13559-201ENSMUST00000120476 863 ntBASIC18.77■□□□□ 0.6
Trim61Q8JZK6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim61Q8JZK6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim61Q8JZK6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Trim61Q8JZK6 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.77■□□□□ 0.6
Trim61Q8JZK6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim61Q8JZK6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim61Q8JZK6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim61Q8JZK6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Trim61Q8JZK6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim61Q8JZK6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim61Q8JZK6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim61Q8JZK6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Gm11539-201ENSMUST00000119837 557 ntBASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Gm13436-201ENSMUST00000120418 567 ntBASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim61Q8JZK6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim61Q8JZK6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim61Q8JZK6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.75■□□□□ 0.59
Trim61Q8JZK6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim61Q8JZK6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim61Q8JZK6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim61Q8JZK6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim61Q8JZK6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim61Q8JZK6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim61Q8JZK6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim61Q8JZK6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim61Q8JZK6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim61Q8JZK6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.73■□□□□ 0.59
Trim61Q8JZK6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.73■□□□□ 0.59
Trim61Q8JZK6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim61Q8JZK6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.73■□□□□ 0.59
Trim61Q8JZK6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim61Q8JZK6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms