Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc28aQ8CEI3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc28aQ8CEI3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc28aQ8CEI3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc28aQ8CEI3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.89■□□□□ 0.61
Ccdc28aQ8CEI3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.89■□□□□ 0.61
Ccdc28aQ8CEI3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ccdc28aQ8CEI3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc28aQ8CEI3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc28aQ8CEI3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc28aQ8CEI3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc28aQ8CEI3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc28aQ8CEI3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc28aQ8CEI3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc28aQ8CEI3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc28aQ8CEI3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc28aQ8CEI3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc28aQ8CEI3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc28aQ8CEI3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc28aQ8CEI3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc28aQ8CEI3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc28aQ8CEI3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc28aQ8CEI3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc28aQ8CEI3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.88■□□□□ 0.61
Ccdc28aQ8CEI3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc28aQ8CEI3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc28aQ8CEI3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc28aQ8CEI3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc28aQ8CEI3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc28aQ8CEI3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc28aQ8CEI3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc28aQ8CEI3 Gm13234-201ENSMUST00000120010 747 ntBASIC18.87■□□□□ 0.61
Ccdc28aQ8CEI3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc28aQ8CEI3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc28aQ8CEI3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc28aQ8CEI3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.87■□□□□ 0.61
Ccdc28aQ8CEI3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc28aQ8CEI3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc28aQ8CEI3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc28aQ8CEI3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc28aQ8CEI3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc28aQ8CEI3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc28aQ8CEI3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.85■□□□□ 0.61
Ccdc28aQ8CEI3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28aQ8CEI3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28aQ8CEI3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28aQ8CEI3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28aQ8CEI3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc28aQ8CEI3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28aQ8CEI3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28aQ8CEI3 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.85■□□□□ 0.61
Ccdc28aQ8CEI3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28aQ8CEI3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28aQ8CEI3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28aQ8CEI3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28aQ8CEI3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28aQ8CEI3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc28aQ8CEI3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28aQ8CEI3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28aQ8CEI3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28aQ8CEI3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28aQ8CEI3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28aQ8CEI3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28aQ8CEI3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.84■□□□□ 0.61
Ccdc28aQ8CEI3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28aQ8CEI3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28aQ8CEI3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28aQ8CEI3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28aQ8CEI3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc28aQ8CEI3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc28aQ8CEI3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc28aQ8CEI3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc28aQ8CEI3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms