Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Haglr-201ENSMUST00000100000 2085 ntBASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc5a7Q8BGY9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Gm27801-201ENSMUST00000184174 223 ntBASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc5a7Q8BGY9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc5a7Q8BGY9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Gm5812-201ENSMUST00000061073 957 ntBASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc5a7Q8BGY9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms