Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Grk6-206ENSMUST00000224995 2971 ntBASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.22■□□□□ 0.35
Trim23Q8BGX0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim23Q8BGX0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim23Q8BGX0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim23Q8BGX0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim23Q8BGX0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim23Q8BGX0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim23Q8BGX0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim23Q8BGX0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim23Q8BGX0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trim23Q8BGX0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim23Q8BGX0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
Trim23Q8BGX0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim23Q8BGX0 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.22■□□□□ 0.35
Trim23Q8BGX0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim23Q8BGX0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.22■□□□□ 0.35
Trim23Q8BGX0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim23Q8BGX0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim23Q8BGX0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim23Q8BGX0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.21■□□□□ 0.35
Trim23Q8BGX0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim23Q8BGX0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim23Q8BGX0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.21■□□□□ 0.35
Trim23Q8BGX0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
Trim23Q8BGX0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim23Q8BGX0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Trim23Q8BGX0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim23Q8BGX0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trim23Q8BGX0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Rarb-207ENSMUST00000225921 2756 ntBASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Gm37292-201ENSMUST00000192062 758 ntBASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Gm42545-201ENSMUST00000202755 922 ntBASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim23Q8BGX0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim23Q8BGX0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trim23Q8BGX0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim23Q8BGX0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim23Q8BGX0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.19■□□□□ 0.34
Trim23Q8BGX0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim23Q8BGX0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Trim23Q8BGX0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.19■□□□□ 0.34
Trim23Q8BGX0 Gm43183-201ENSMUST00000200632 547 ntBASIC17.19■□□□□ 0.34
Trim23Q8BGX0 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.19■□□□□ 0.34
Trim23Q8BGX0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim23Q8BGX0 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.19■□□□□ 0.34
Trim23Q8BGX0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim23Q8BGX0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim23Q8BGX0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim23Q8BGX0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim23Q8BGX0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim23Q8BGX0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim23Q8BGX0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Gm11643-201ENSMUST00000119578 864 ntBASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim23Q8BGX0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim23Q8BGX0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim23Q8BGX0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim23Q8BGX0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim23Q8BGX0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trim23Q8BGX0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim23Q8BGX0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim23Q8BGX0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Trim23Q8BGX0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.17■□□□□ 0.34
Trim23Q8BGX0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim23Q8BGX0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim23Q8BGX0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim23Q8BGX0 Mir1199-201ENSMUST00000117015 119 ntBASIC17.16■□□□□ 0.34
Trim23Q8BGX0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms