Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp6nlQ80XC3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp6nlQ80XC3 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.74■□□□□ 0.75
Usp6nlQ80XC3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp6nlQ80XC3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp6nlQ80XC3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp6nlQ80XC3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp6nlQ80XC3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp6nlQ80XC3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Mir5130-201ENSMUST00000175160 84 ntBASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Gm2274-201ENSMUST00000184539 609 ntBASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp6nlQ80XC3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Usp6nlQ80XC3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp6nlQ80XC3 AA414768-201ENSMUST00000121924 1257 ntBASIC19.72■□□□□ 0.75
Usp6nlQ80XC3 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.72■□□□□ 0.75
Usp6nlQ80XC3 Gm4974-201ENSMUST00000209974 875 ntBASIC19.72■□□□□ 0.75
Usp6nlQ80XC3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp6nlQ80XC3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp6nlQ80XC3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp6nlQ80XC3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp6nlQ80XC3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Usp6nlQ80XC3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp6nlQ80XC3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp6nlQ80XC3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp6nlQ80XC3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.71■□□□□ 0.75
Usp6nlQ80XC3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.71■□□□□ 0.75
Usp6nlQ80XC3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp6nlQ80XC3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp6nlQ80XC3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp6nlQ80XC3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp6nlQ80XC3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp6nlQ80XC3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp6nlQ80XC3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp6nlQ80XC3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp6nlQ80XC3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp6nlQ80XC3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Usp6nlQ80XC3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp6nlQ80XC3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp6nlQ80XC3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Usp6nlQ80XC3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp6nlQ80XC3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp6nlQ80XC3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp6nlQ80XC3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.7■□□□□ 0.74
Usp6nlQ80XC3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp6nlQ80XC3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.69■□□□□ 0.74
Usp6nlQ80XC3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp6nlQ80XC3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp6nlQ80XC3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp6nlQ80XC3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp6nlQ80XC3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Usp6nlQ80XC3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp6nlQ80XC3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp6nlQ80XC3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp6nlQ80XC3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Usp6nlQ80XC3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp6nlQ80XC3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp6nlQ80XC3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Usp6nlQ80XC3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.69■□□□□ 0.74
Usp6nlQ80XC3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp6nlQ80XC3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp6nlQ80XC3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp6nlQ80XC3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp6nlQ80XC3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp6nlQ80XC3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp6nlQ80XC3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp6nlQ80XC3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp6nlQ80XC3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp6nlQ80XC3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp6nlQ80XC3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.68■□□□□ 0.74
Usp6nlQ80XC3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp6nlQ80XC3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp6nlQ80XC3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp6nlQ80XC3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp6nlQ80XC3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp6nlQ80XC3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms