Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Smad6-203ENSMUST00000179458 273 ntBASIC18.62■□□□□ 0.57
Srrm3Q80WV7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm3Q80WV7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Srrm3Q80WV7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm3Q80WV7 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.62■□□□□ 0.57
Srrm3Q80WV7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.62■□□□□ 0.57
Srrm3Q80WV7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm3Q80WV7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm3Q80WV7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm3Q80WV7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Srrm3Q80WV7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm3Q80WV7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm3Q80WV7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm3Q80WV7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm3Q80WV7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Srrm3Q80WV7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.61■□□□□ 0.57
Srrm3Q80WV7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm3Q80WV7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Srrm3Q80WV7 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.61■□□□□ 0.57
Srrm3Q80WV7 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.61■□□□□ 0.57
Srrm3Q80WV7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Srrm3Q80WV7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm3Q80WV7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.61■□□□□ 0.57
Srrm3Q80WV7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm3Q80WV7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm3Q80WV7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm3Q80WV7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Srrm3Q80WV7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Gm8520-201ENSMUST00000186517 868 ntBASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm3Q80WV7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm3Q80WV7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm3Q80WV7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm3Q80WV7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm3Q80WV7 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.59■□□□□ 0.57
Srrm3Q80WV7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm3Q80WV7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.59■□□□□ 0.57
Srrm3Q80WV7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.59■□□□□ 0.57
Srrm3Q80WV7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.59■□□□□ 0.57
Srrm3Q80WV7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.59■□□□□ 0.57
Srrm3Q80WV7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm3Q80WV7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Srrm3Q80WV7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm3Q80WV7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm3Q80WV7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm3Q80WV7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Srrm3Q80WV7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Srrm3Q80WV7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Srrm3Q80WV7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Srrm3Q80WV7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.58■□□□□ 0.56
Srrm3Q80WV7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.58■□□□□ 0.56
Srrm3Q80WV7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Srrm3Q80WV7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.58■□□□□ 0.56
Srrm3Q80WV7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Srrm3Q80WV7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Srrm3Q80WV7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Srrm3Q80WV7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srrm3Q80WV7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srrm3Q80WV7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Srrm3Q80WV7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srrm3Q80WV7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.57■□□□□ 0.56
Srrm3Q80WV7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Srrm3Q80WV7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srrm3Q80WV7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srrm3Q80WV7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srrm3Q80WV7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srrm3Q80WV7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srrm3Q80WV7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srrm3Q80WV7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srrm3Q80WV7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Srrm3Q80WV7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Srrm3Q80WV7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srrm3Q80WV7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.56■□□□□ 0.56
Srrm3Q80WV7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Srrm3Q80WV7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srrm3Q80WV7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.56■□□□□ 0.56
Srrm3Q80WV7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srrm3Q80WV7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srrm3Q80WV7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms